Information for 6-GTTTTTAGGCATC (Motif 6)

C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
Reverse Opposite:
A C T G C T G A A G C T A C T G G T A C A G T C A C G T C G T A C G T A C G T A C G T A G T C A G T A C
p-value:1e-13
log p-value:-3.151e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.79%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.2 +/- 27.0bp
Average Position of motif in Background82.3 +/- 2.5bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD12/MA0873.1/Jaspar

Match Rank:1
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GTTTTTAGGCATC
-NTTTTACGACT-
 C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
A C G T C A G T C G A T G C A T A G C T G C A T C T G A A G T C A T C G T C G A A G T C A G C T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTTAGGCATC-
NGANTTTTATGGCTCN
 A C G T A C G T C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C A C G T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:3
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GTTTTTAGGCATC
--TTTTATTRGN-
 C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
A C G T A C G T C G A T A C G T A C G T C G A T C G T A G C A T C A G T C T G A A T C G G C T A A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GTTTTTAGGCATC
-NTTTTATTGG--
 C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T A C G T

HOXC13/MA0907.1/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTTTAGGCATC
-NTTTTACGAGN-
 C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-GTTTTTAGGCATC--
TCTTTCGAGGAATTTG
 A C G T C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C A C G T A C G T
C G A T G A T C G A C T C G A T C G A T A G T C A C T G C G T A T C A G C A T G C G T A G C T A G A C T G C A T G A C T T A C G

HOXC12/MA0906.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GTTTTTAGGCATC
-NTTTTACGACC-
 C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
A C G T C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTTAGGCATC
NGCTTTCTAGGAAN-
 A C G T A C G T C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
C G A T C A T G G T A C G A C T A G C T G A C T A G T C A G C T C G T A C T A G C A T G T C G A G C T A G T C A A C G T

PH0078.1_Hoxd13/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTTAGGCATC-
NNANTTTTATTGGNNN
 A C G T A C G T C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C A C G T
C G T A C A T G C T G A C T G A C A G T C G A T C G A T G C A T C T G A G A C T C G A T C T A G T C A G C G A T G C T A C A T G

MEF2A/MA0052.3/Jaspar

Match Rank:10
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---GTTTTTAGGCATC
TCTATTTTTAGA----
 A C G T A C G T A C G T C A T G A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G G T A C C T G A A G C T A G T C
C A G T G A T C C A G T C T G A C G A T C G A T C G A T G C A T C G A T C T G A C A T G G T C A A C G T A C G T A C G T A C G T