Information for 11-CGTGGCCTAC (Motif 39)

T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
Reverse Opposite:
T C A G A G C T G T C A A C T G C T A G A G T C T A G C C G T A G T A C A C T G
p-value:1e-6
log p-value:-1.426e+01
Information Content per bp:1.810
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif1.97%
Number of Background Sequences with motif191.4
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets52.5 +/- 23.2bp
Average Position of motif in Background48.5 +/- 28.4bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CGTGGCCTAC
GGGGCCGAGGCCTG-
 A C G T A C G T A C G T A C G T A C G T T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G A C G T

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGTGGCCTAC
-GTGACCTT-
 T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CGTGGCCTAC
CTAGGCCT--
 T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
T A G C A G C T C T G A A C T G A T C G A T G C G T A C A C G T A C G T A C G T

Creb3l2/MA0608.1/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---CGTGGCCTAC
ACACGTGGC----
 A C G T A C G T A C G T T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
G C T A A T G C C G T A A G T C A C T G A C G T A T C G C A T G G T A C A C G T A C G T A C G T A C G T

Klf12/MA0742.1/Jaspar

Match Rank:5
Score:0.62
Offset:-8
Orientation:reverse strand
Alignment:--------CGTGGCCTAC
NANAAGGGCGTGGTC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
C G T A C G T A C G A T C G T A C G T A C T A G T C A G C T A G G A T C C A T G A C G T A T C G C A T G A G C T G T A C A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CGTGGCCTAC
CNAGGCCT--
 T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T

SP4/MA0685.1/Jaspar

Match Rank:7
Score:0.60
Offset:-8
Orientation:reverse strand
Alignment:--------CGTGGCCTAC
NAAGGGGGCGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
C T G A C T G A C G T A C T A G C A T G T C A G A C T G A T C G T G A C A C T G A C G T T C A G C A T G G A T C G A C T C G A T T C G A A C G T

Mycn/MA0104.3/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CGTGGCCTAC
CACGTGGC----
 A C G T A C G T T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
A G T C C G T A A G T C A C T G A C G T A C T G A T C G G A T C A C G T A C G T A C G T A C G T

CREB3L1/MA0839.1/Jaspar

Match Rank:9
Score:0.59
Offset:-6
Orientation:reverse strand
Alignment:------CGTGGCCTAC
TGATGACGTGGCAN--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C
G A C T C T A G T C G A G A C T A C T G G C T A A G T C A T C G A G C T C T A G C A T G G A T C C T G A A G C T A C G T A C G T

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:CGTGGCCTAC--
--TGACCTARTT
 T A G C C A T G A C G T A T C G C T A G G A T C G T A C C A G T C T G A A G T C A C G T A C G T
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T