Information for 14-GGGRMWTTCCMTC (Motif 27)

A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
Reverse Opposite:
A C T G C G T A A C G T A C T G C T A G C G T A C G T A C G A T A C T G A G C T A G T C A G T C A G T C
p-value:1e-8
log p-value:-1.980e+01
Information Content per bp:1.873
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.52%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.8 +/- 25.6bp
Average Position of motif in Background23.0 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.84
Offset:-1
Orientation:forward strand
Alignment:-GGGRMWTTCCMTC
NGGGGATTTCCC--
 A C G T A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.83
Offset:0
Orientation:forward strand
Alignment:GGGRMWTTCCMTC
GGGGATTTCC---
 A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:3
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGRMWTTCCMTC
GGGGATTTCC---
 A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.82
Offset:0
Orientation:forward strand
Alignment:GGGRMWTTCCMTC
GGGAATTTCC---
 A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:5
Score:0.81
Offset:0
Orientation:reverse strand
Alignment:GGGRMWTTCCMTC
GGGAATTTCC---
 A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:6
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GGGRMWTTCCMTC
AGGGGAATCCCCT-
 A C G T A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:7
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-GGGRMWTTCCMTC
AGGGGATTCCCCT-
 A C G T A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGRMWTTCCMTC
GGGGGAATCCCC--
 A C G T A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:GGGRMWTTCCMTC
---GCATTCCAGN
 A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
A C G T A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G

TEAD4/MA0809.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGGRMWTTCCMTC
--CACATTCCAT-
 A C T G A C T G A C T G C T G A G T A C C G T A A C G T A C G T A G T C A G T C G T C A C G A T A G T C
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T A C G T