p-value: | 1e-9 |
log p-value: | -2.229e+01 |
Information Content per bp: | 1.657 |
Number of Target Sequences with motif | 70.0 |
Percentage of Target Sequences with motif | 9.17% |
Number of Background Sequences with motif | 1932.6 |
Percentage of Background Sequences with motif | 3.99% |
Average Position of motif in Targets | 50.7 +/- 25.8bp |
Average Position of motif in Background | 50.3 +/- 27.8bp |
Strand Bias (log2 ratio + to - strand density) | 0.8 |
Multiplicity (# of sites on avg that occur together) | 1.10 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
SD0003.1_at_AC_acceptor/Jaspar
Match Rank: | 1 |
Score: | 0.77 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GATATTCTTG AAGATATCCTT- |
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PB0178.1_Sox8_2/Jaspar
Match Rank: | 2 |
Score: | 0.62 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GATATTCTTG----- -ACATTCATGACACG |
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Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer
Match Rank: | 3 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATTCTTG GAATATTCAT- |
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Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GATATTCTTG-- KCTATTTTTRGH |
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MEF2C/MA0497.1/Jaspar
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATTCTTG---- TTCTATTTTTAGNNN |
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Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer
Match Rank: | 6 |
Score: | 0.60 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATATTCTTG-- GCTATTTTTAGC |
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Sox5/MA0087.1/Jaspar
Match Rank: | 7 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | forward strand |
Alignment: | GATATTCTTG ---ATTGTTA |
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Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer
Match Rank: | 8 |
Score: | 0.60 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GATATTCTTG GHATATKCAT- |
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Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer
Match Rank: | 9 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | GATATTCTTG-- GCTATTTTTGGM |
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OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer
Match Rank: | 10 |
Score: | 0.59 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GATATTCTTG-- ATGAATATTCATGAG |
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