Information for 2-TTCAGCACCRTGGACA (Motif 2)

G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
Reverse Opposite:
A C G T C T A G A C G T A T G C A T G C G C T A A G T C C T A G A T C G C G A T A C T G G A T C A C G T A C T G C T G A C G T A
p-value:1e-24
log p-value:-5.563e+01
Information Content per bp:1.688
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.44%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets53.9 +/- 23.4bp
Average Position of motif in Background77.7 +/- 15.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.36
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.82
Offset:0
Orientation:forward strand
Alignment:TTCAGCACCRTGGACA-----
TTCAGCACCATGGACAGCGCC
 G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A A C G T A C G T A C G T A C G T A C G T
C A G T A G C T G A T C T C G A T A C G A T G C C G T A A T G C G A T C G C T A G A C T C T A G T C A G G T C A A T G C G C T A T C A G G T A C C A T G T A G C G A T C

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TTCAGCACCRTGGACA-----
-TCAGCACCATGGACAGCTCC
 G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G A T C C T G A T C A G T A G C C T G A A T G C G A T C G C T A G A C T C T A G C T A G G T C A A T G C C G T A T C A G G T A C C A G T T A G C G A T C

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGCACCRTGGACA
SCTGTCARCACC-------
 A C G T A C G T A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
T A G C G A T C C G A T C A T G G C A T A G T C G T C A C T G A A G T C C T G A T A G C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:4
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TTCAGCACCRTGGACA
GTCAGCANNTN-----
 G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TTCAGCACCRTGGACA
TGAGTCAGCA---------
 A C G T A C G T A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
G A C T T A C G C G T A T A C G G A C T G T A C G C T A C T A G A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TTCAGCACCRTGGACA
CTGAGTCAGCAATTT-----
 A C G T A C G T A C G T A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TTCAGCACCRTGGACA
NGTCAGCANTTT-----
 A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
G T C A T A C G A G C T G T A C C T G A C A T G T A G C C T G A G C A T C G A T G C A T G C A T A C G T A C G T A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTCAGCACCRTGGACA
HWWGTCAGCAWWTTT----
 A C G T A C G T A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:9
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TTCAGCACCRTGGACA
GCTGAGTCAGCAATTTTT---
 A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----TTCAGCACCRTGGACA
NCTANGTCAGCAAATTT----
 A C G T A C G T A C G T A C G T A C G T G A C T A G C T A G T C G T C A C A T G G T A C C G T A A T G C G A T C T C A G C G A T A T C G T A C G T G C A G A T C G T C A
C A G T G A T C A G C T C G T A G C T A T C A G A C G T G T A C C G T A C A T G G A T C C G T A G T C A C G T A G C A T G A C T C G A T A C G T A C G T A C G T A C G T