Information for 11-DGCTGCATTTACAGTA (Motif 16)

C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
Reverse Opposite:
A C G T C G T A A G T C A C G T A C T G A G C T C G T A C G T A C T G A A C G T A C T G A G T C C G T A A C T G A G T C G A C T
p-value:1e-11
log p-value:-2.557e+01
Information Content per bp:1.856
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.66%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.4 +/- 28.8bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0158.1_Rhox11_2/Jaspar

Match Rank:1
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:DGCTGCATTTACAGTA----
---TCNCTTTACAGCGNNNT
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:DGCTGCATTTACAGTA
NGCTN-----------
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.52
Offset:3
Orientation:forward strand
Alignment:DGCTGCATTTACAGTA
---TTCATTTGCATAT
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
A C G T A C G T A C G T G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.50
Offset:6
Orientation:forward strand
Alignment:DGCTGCATTTACAGTA
------ATTTGCATAA
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G C T C G A T C T A G G T A C C G T A A G C T C G T A G C T A

ISL2/MA0914.1/Jaspar

Match Rank:5
Score:0.50
Offset:4
Orientation:forward strand
Alignment:DGCTGCATTTACAGTA
----GCACTTAA----
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.50
Offset:3
Orientation:reverse strand
Alignment:DGCTGCATTTACAGTA
---TKCTGTTCCA---
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
A C G T A C G T A C G T A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:DGCTGCATTTACAGTA----
---TCNNTTTACAGCGNNNT
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:DGCTGCATTTACAGTA----
---TCNNTTTACAGCGNNNT
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0169.1_Sox15_2/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:DGCTGCATTTACAGTA--
---TNGAATTTCATTNAN
 C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A A C G T A C G T
A C G T A C G T A C G T A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----DGCTGCATTTACAGTA
CAGCAGCTGN----------
 A C G T A C G T A C G T A C G T C A G T A C T G A G T C A C G T A C T G A G T C G T C A A G C T A C G T A C G T C T G A A G T C C G T A A C T G C G A T G T C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T