p-value: | 1e-11 |
log p-value: | -2.557e+01 |
Information Content per bp: | 1.874 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 0.66% |
Number of Background Sequences with motif | 1.8 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 30.8 +/- 17.4bp |
Average Position of motif in Background | 26.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 1 |
Score: | 0.69 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GGCSACTGAYSCR RGGGCACTAACY-- |
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FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGCSACTGAYSCR NAGGTCANTGACCT- |
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POL004.1_CCAAT-box/Jaspar
Match Rank: | 3 |
Score: | 0.57 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGCSACTGAYSCR ACTAGCCAATCA---- |
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PB0048.1_Nkx3-1_1/Jaspar
Match Rank: | 4 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGCSACTGAYSCR- CTTAACCACTTAAGGAT |
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POL002.1_INR/Jaspar
Match Rank: | 5 |
Score: | 0.56 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGCSACTGAYSCR -NNNANTGA---- |
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PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 6 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGCSACTGAYSCR---- NGTGTTCAVTSAAGCGKAAA |
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Nkx3-1/MA0124.2/Jaspar
Match Rank: | 7 |
Score: | 0.55 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGCSACTGAYSCR -ACCACTTAA--- |
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PB0051.1_Osr2_1/Jaspar
Match Rank: | 8 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GGCSACTGAYSCR CNNNGCTACTGTANNN |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 9 |
Score: | 0.53 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGCSACTGAYSCR----- --NNNNTGACCCGGCGCG |
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NKX3-2/MA0122.2/Jaspar
Match Rank: | 10 |
Score: | 0.53 |
Offset: | 1 |
Orientation: | forward strand |
Alignment: | GGCSACTGAYSCR -ACCACTTAA--- |
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