Information for 7-GCTTTTCTTGBTGCTC (Motif 12)

C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
Reverse Opposite:
A T C G C G T A A C T G A T G C C G T A T G A C T A G C G T C A C G T A A C T G C G T A C G T A G T C A C T G A C T A G G A T C
p-value:1e-11
log p-value:-2.732e+01
Information Content per bp:1.777
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif8.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.2 +/- 24.7bp
Average Position of motif in Background54.4 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GCTTTTCTTGBTGCTC-
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GCTTTTCTTGBTGCTC--
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GCTTTTCTTGBTGCTC---
GNCTGTASTRNTGBCTCHTT
 A C G T C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C A C G T A C G T A C G T
C T A G G A C T G A T C A C G T A T C G A G C T C T G A A T C G C G A T C T A G G A T C G A C T C A T G A T C G G T A C G A C T A G T C G C A T A G C T C G A T

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCTTTTCTTGBTGCTC
-TTTTTTTTCNNGTN-
 C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
A C G T G A C T G C A T C A G T C G A T A G C T A G C T G C A T G C A T A G T C T G A C G T C A A C T G G A C T C G T A A C G T

Sox3/MA0514.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GCTTTTCTTGBTGCTC
-CCTTTGTTTT-----
 C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:6
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:GCTTTTCTTGBTGCTC
--TTTTATGGCTN---
 C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCTTTTCTTGBTGCTC
TCTTATCT--------
 C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCTTTTCTTGBTGCTC
-CTGTTCCTGG-----
 C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T A C G T

PH0064.1_Hoxb9/Jaspar

Match Rank:9
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--GCTTTTCTTGBTGCTC
NGANTTTTATGGCTCN--
 A C G T A C G T C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T A C G T

PB0137.1_Irf3_2/Jaspar

Match Rank:10
Score:0.51
Offset:-4
Orientation:reverse strand
Alignment:----GCTTTTCTTGBTGCTC
NNGCACCTTTCTCC------
 A C G T A C G T A C G T A C G T C T A G A G T C A G C T A C G T A C G T A C G T A G T C A C G T A C G T A T C G A C T G A C G T A T C G A G T C C G A T T A G C
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C A C G T A C G T A C G T A C G T A C G T A C G T