Information for 2-AAKGCAASAGGGAGGT (Motif 7)

T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
Reverse Opposite:
C G T A A G T C A G T C A C G T A G T C A G T C G T A C A C G T A T C G A C G T A C G T C A T G G T A C G T C A A G C T A C G T
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.728
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif1.49%
Number of Background Sequences with motif45.2
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets50.1 +/- 16.6bp
Average Position of motif in Background46.8 +/- 23.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Rarb(var.2)/MA0858.1/Jaspar

Match Rank:1
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT--
-AGGTCAACTAAAGGTCA
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T A C G T A C G T
A C G T T C G A A T C G C A T G A G C T A T G C C T G A G T C A T G A C A G C T C G T A C T G A C T G A T A C G A C T G A C G T A G T C C T G A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.53
Offset:8
Orientation:reverse strand
Alignment:AAKGCAASAGGGAGGT----
--------SDGCAGGTGCNS
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C

MF0001.1_ETS_class/Jaspar

Match Rank:3
Score:0.53
Offset:6
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT
------ACCGGAAG--
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A T A G C T G A C C A T G C T A G C T G A G C T A T C A G A C G T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:AAKGCAASAGGGAGGT
---------NGAAGC-
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

RARA::RXRA/MA0159.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT--
-AGGTCACGGAGAGGTCA
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T A C G T A C G T
A C G T C T G A A C T G C A T G A C G T A T G C C T G A A G C T T A C G T C A G C T G A T A C G T C G A A C T G A C T G C A G T A T G C C G T A

ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer

Match Rank:6
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT
-----AACCGGAAGT-
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A C T G A T A G C T G A C T C A G T C A G C G T A C G T A T C A G A G C T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:7
Score:0.52
Offset:9
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT--
---------AACAGGTGT
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T

Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.52
Offset:5
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT
-----AACAGGAAGT-
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T G C A C T G A A T G C G T C A A C T G A C T G C G T A C G T A C T A G A G C T A C G T

GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT
-----NACCGGAAGT-
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A G C G T A C T C A G T A C G C G T A C G T A T C A G A G C T A C G T

EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.51
Offset:5
Orientation:forward strand
Alignment:AAKGCAASAGGGAGGT
-----AVCAGGAAGT-
 T G C A C T G A A C G T A C T G G A T C G T C A G T C A T A C G G T C A A C T G A C T G T A C G C G T A A C T G T A C G A C G T
A C G T A C G T A C G T A C G T A C G T C G T A T A G C T A G C T G C A A C T G C T A G C G T A C G T A T C A G G A C T A C G T