Information for 3-CTMAKAAGWKACT (Motif 3)

A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T G T C A C G A T A G T C A C G T A C G T G T A C A C G T C A T G C G T A A T C G
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.8 +/- 17.2bp
Average Position of motif in Background68.8 +/- 14.6bp
Strand Bias (log2 ratio + to - strand density)-2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTMAKAAGWKACT
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:2
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:CTMAKAAGWKACT-----
---AGATGCTRCTRCCHT
 A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

PH0034.1_Gbx2/Jaspar

Match Rank:3
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----CTMAKAAGWKACT
AGCGCTAATTAGCGATT
 A C G T A C G T A C G T A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
C G T A T A C G T G A C T C A G A T G C A G C T G T C A G C T A C A G T A C G T C T G A T A C G A G T C T A C G C T G A A C G T C A G T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:4
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CTMAKAAGWKACT
CCYMATAAAA----
 A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
T G A C A T G C A G T C G T C A C T G A A C G T C G T A C G T A C G T A G C T A A C G T A C G T A C G T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:5
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTMAKAAGWKACT
GTAACTAATTAACTACT
 A C G T A C G T A C G T A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CTMAKAAGWKACT
TTTCTNAGAAAN----
 A C G T A C G T A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
A G C T A C G T A C G T A G T C G A C T G C T A C T G A A C T G C G T A C G T A T G C A G A C T A C G T A C G T A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:CTMAKAAGWKACT-----
---AGAAATGACTTCCCT
 A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

MEF2A/MA0052.3/Jaspar

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-CTMAKAAGWKACT
TCTAAAAATAGA--
 A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
C A G T G A T C A G C T G C T A C G T A G C T A C G T A G C T A A G C T G T C A C T A G G T C A A C G T A C G T

PH0027.1_Emx2/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:forward strand
Alignment:----CTMAKAAGWKACT
ACCACTAATTAGTGGAC
 A C G T A C G T A C G T A C G T A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T
G C T A T A G C T G A C T C G A A G T C G A C T G T C A G C T A C A G T A C G T C T G A T C A G A G C T A C T G T A C G G C T A A G T C

PB0203.1_Zfp691_2/Jaspar

Match Rank:10
Score:0.50
Offset:4
Orientation:forward strand
Alignment:CTMAKAAGWKACT--------
----TACGAGACTCCTCTAAC
 A T G C C G A T G T A C C G T A A C T G C G T A C G T A A C T G C G T A A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C