Information for 11-CTGTGVAAAACAW (Motif 22)

T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
Reverse Opposite:
G C T A G C A T A C T G A C G T C A G T A C G T A C G T A C G T G A T C G C T A T A G C G T C A A T C G
p-value:1e-7
log p-value:-1.643e+01
Information Content per bp:1.621
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.2 +/- 17.9bp
Average Position of motif in Background41.4 +/- 9.4bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC2/MA0152.1/Jaspar

Match Rank:1
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CTGTGVAAAACAW
---TGGAAAA---
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
A C G T A C G T A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTGTGVAAAACAW
AGGTGHCAGACA-
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTGTGVAAAACAW-
CAATTGCAAAAATAT
 A C G T T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

NFAT5/MA0606.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTGTGVAAAACAW
-NATGGAAAAN--
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
A C G T G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T

PB0141.1_Isgf3g_2/Jaspar

Match Rank:5
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CTGTGVAAAACAW-----
----GCAAAACATTACTA
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T A G C C G T A C G T A C G T A C T G A T A G C C G T A A C G T C A G T C G T A G T A C G A C T C T G A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CTGTGVAAAACAW
AGGTGNCAGACAG
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PB0044.1_Mtf1_1/Jaspar

Match Rank:7
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTGTGVAAAACAW
GGGCCGTGTGCAAAAA--
 A C G T A C G T A C G T A C G T A C G T T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGTGVAAAACAW----
AACACCAAAACAAAGGA
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T A C G T A C G T A C G T A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CTGTGVAAAACAW
-AATGGAAAAT--
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T

PB0182.1_Srf_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGTGVAAAACAW----
GTTAAAAAAAAAAATTA
 T A G C C A G T A T C G C G A T C A T G T G C A T G C A T G C A G T C A G T C A T G A C C G T A C G A T A C G T A C G T A C G T A C G T
T A C G A C G T C G A T C G T A C T G A C T G A T G C A T G C A G T C A G C T A G T C A G T C A G T C A T G C A A C G T G C A T G C A T