Information for 8-GTCCGATTAT (Motif 20)

C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
Reverse Opposite:
C G T A C G A T C G T A C G T A A C G T A G T C T A C G C T A G C G T A A G T C
p-value:1e-8
log p-value:-1.878e+01
Information Content per bp:1.807
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.80%
Number of Background Sequences with motif13.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets62.3 +/- 24.9bp
Average Position of motif in Background39.1 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX1/MA0711.1/Jaspar

Match Rank:1
Score:0.74
Offset:2
Orientation:reverse strand
Alignment:GTCCGATTAT
--CGGATTAN
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A

ALX3/MA0634.1/Jaspar

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:GTCCGATTAT-
-TCTAATTAAA
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T A C G T
A C G T G A C T A G T C G A C T C T G A G T C A G C A T G A C T G C T A T C G A T G C A

BSX/MA0876.1/Jaspar

Match Rank:3
Score:0.71
Offset:2
Orientation:forward strand
Alignment:GTCCGATTAT
--CCAATTAA
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A

Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:4
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GTCCGATTAT
GTAATCDGATTA-
 A C G T A C G T A C G T C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
C A T G C G A T T C G A C T G A G C A T A G T C C A T G T C A G C T G A A C G T G A C T C G T A A C G T

GSC2/MA0891.1/Jaspar

Match Rank:5
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTCCGATTAT-
-GNGGATTAGN
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T A C G T
A C G T C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G

OTX2/MA0712.1/Jaspar

Match Rank:6
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTCCGATTAT
--NGGATTAA
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A

BARX1/MA0875.1/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GTCCGATTAT
--GCAATTAG
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTCCGATTAT
--RGGATTAR
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G

Prrx2/MA0075.2/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTCCGATTAT
--CCAATTAA
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T A G T C G A T C T C G A T G C A G A C T G A C T G C T A T C G A

SHOX/MA0630.1/Jaspar

Match Rank:10
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTCCGATTAT
--NCAATTAN
 C T A G A C G T A G T C A T G C C T A G C G T A A C G T A C G T C G T A C G A T
A C G T A C G T A G T C G A T C G C T A G T C A A G C T A G C T C G T A C T G A