Information for 2-GCAGCTCCGGAGC (Motif 2)

A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
Reverse Opposite:
A C T G A T G C A C G T A G T C A G T C A C T G A C T G C T G A C T A G G T A C A C G T C T A G A G T C
p-value:1e-13
log p-value:-3.060e+01
Information Content per bp:1.906
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 21.9bp
Average Position of motif in Background40.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.66
Offset:7
Orientation:reverse strand
Alignment:GCAGCTCCGGAGC
-------CGGAGC
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A C T G A C T G C G T A A C T G A G T C

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTCCGGAGC
CGCAGCTGCG----
 A C G T A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----GCAGCTCCGGAGC
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

POL011.1_XCPE1/Jaspar

Match Rank:4
Score:0.54
Offset:3
Orientation:forward strand
Alignment:GCAGCTCCGGAGC
---GGGCGGGACC
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
A C G T A C G T A C G T A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C

PB0077.1_Spdef_1/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GCAGCTCCGGAGC---
GTACATCCGGATTTTT
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C A C G T A C G T A C G T
T C A G G A C T C T G A A G T C C G T A C G A T T A G C G T A C A C T G A T C G C T G A G C A T G C A T G A C T A G C T A G C T

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.53
Offset:5
Orientation:reverse strand
Alignment:GCAGCTCCGGAGC--
-----RCCGGAARYN
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

ETV4/MA0764.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAGCTCCGGAGC
-TACTTCCGGT--
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
A C G T G A C T T C G A A G T C C G A T G A C T G T A C A T G C A C T G A T C G G A C T A C G T A C G T

ETV1/MA0761.1/Jaspar

Match Rank:8
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAGCTCCGGAGC
-NACTTCCGGT--
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
A C G T G A C T T C G A A G T C C G A T C G A T G T A C A G T C A C T G A T C G G A C T A C G T A C G T

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCTCCGGAGC
NCCACTTCCGG---
 A C G T A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G A C G T A C G T A C G T

FEV/MA0156.2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCAGCTCCGGAGC
-NACTTCCGGT--
 A C T G A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A C T G C G T A A T C G A G T C
A C G T G A T C T C G A A G T C C G A T C G A T G T A C G A T C A C T G A C T G G C A T A C G T A C G T