Information for 5-AAVAGGTTTGTGT (Motif 7)

C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T
Reverse Opposite:
C G T A G T A C C G T A A G T C C G T A C G T A G C T A G T A C A T G C C A G T A C T G C G A T G A C T
p-value:1e-13
log p-value:-3.027e+01
Information Content per bp:1.797
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif18.7
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets45.7 +/- 17.9bp
Average Position of motif in Background57.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAVAGGTTTGTGT----
-ANTCCTTTGTCTNNNN
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

GRHL1/MA0647.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAVAGGTTTGTGT
NAAACCGGTTTT---
 A C G T A C G T C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T
G C T A C G T A C T G A C G T A A T G C G A T C C A T G A C T G G C A T G A C T G C A T C A G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:3
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AAVAGGTTTGTGT------
---NNNNTTGTGTGCTTNN
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0016.1_Foxj1_1/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:AAVAGGTTTGTGT-----
--NNNNTTTGTTTACNNT
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

SRY/MA0084.1/Jaspar

Match Rank:5
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:AAVAGGTTTGTGT--
------ATTGTTTAN
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C

TFCP2/MA0145.3/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AAVAGGTTTGTGT
AAACCGGTTT----
 A C G T C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T
C T G A C T G A C G T A A T G C G A T C C T A G A T C G G C A T G C A T A G C T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AAVAGGTTTGTGT---
-NNNCCATTGTGTNAN
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T A C G T A C G T A C G T
A C G T A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

Foxd3/MA0041.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AAVAGGTTTGTGT
-GAATGTTTGTTT
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T
A C G T C T A G G C T A G C T A G A C T C T A G A C G T C G A T C A G T C T A G G A C T A C G T A G C T

Sox3/MA0514.1/Jaspar

Match Rank:9
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AAVAGGTTTGTGT-
----CCTTTGTTTT
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T

MF0005.1_Forkhead_class/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AAVAGGTTTGTGT
----TGTTTATTT
 C T G A C G T A T G A C G C T A A T C G A C T G C A G T A C G T A C G T T A C G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T A G A G C T G A C T C A G T C T G A A G C T C A G T A G C T