Information for 10-GAATSTMCACARW (Motif 16)

A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A
Reverse Opposite:
C G A T A G C T A C G T A T C G A C G T A C T G C A T G C G T A A T G C C G T A A C G T A C G T A G T C
p-value:1e-9
log p-value:-2.245e+01
Information Content per bp:1.875
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets31.8 +/- 29.3bp
Average Position of motif in Background45.9 +/- 31.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
AAAATGTAAACAAACAG
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
AAAATGTAAACAAACAG
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
C G T A C T G A C G T A C G T A A C G T T C A G C G A T G T C A G C T A C G T A A G T C C G T A G C T A C G T A T A G C T C G A A T C G

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GAATSTMCACARW--
NNGTATGTGCACATNNN
 A C G T A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

PB0019.1_Foxl1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
TAAATGTAAACAAAGGT
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
C G A T C G T A C G T A C G T A G C A T C T A G C G A T G T C A C G T A C T G A A G T C C G T A G C T A C G T A T A C G T C A G A C G T

PB0104.1_Zscan4_1/Jaspar

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
TACATGTGCACATAAAA
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---GAATSTMCACARW
NTGGAATGTN------
 A C G T A C G T A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Foxj3/MA0851.1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
AAAAAGTAAACAAACAC
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0017.1_Foxj3_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
AAAAAGTAAACAAACAC
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
G C T A C T G A G T C A C G T A C T G A T C A G G A C T G T C A G C T A C G T A A G T C C G T A G C T A G C T A T A G C T G A C G T A C

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAATSTMCACARW---
AAAAAGTAAACAAAGAC
 A C G T A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

FOXC2/MA0846.1/Jaspar

Match Rank:10
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GAATSTMCACARW
-TAAGTAAACAAA
 A C T G C G T A C G T A A C G T A T C G A C G T G T A C A G T C C G T A A T G C C G T A C T G A C G T A
A C G T G C A T C T G A G C T A T C A G G A C T G T C A G T C A C T G A A G T C C T G A G C T A G C T A