Information for 11-CTAGAATAAA (Motif 20)

A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A
Reverse Opposite:
C A G T A C G T A C G T C G T A A G C T A C G T A G T C A C G T C T G A A T C G
p-value:1e-6
log p-value:-1.556e+01
Information Content per bp:1.825
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif72.7
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets50.8 +/- 23.8bp
Average Position of motif in Background51.3 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTAGAATAAA--
TACTGGAAAAAAAA
 A C G T A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T
G C A T C T G A T G A C C A G T A C G T T C A G C G T A C G T A T C G A T C G A G C T A G T C A C G T A C T G A

PB0061.1_Sox11_1/Jaspar

Match Rank:2
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAGAATAAA------
ATAAGAACAAAGGACTA
 A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0063.1_Sox13_1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CTAGAATAAA-----
TTAAGAACAATAAATT
 A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T
C G A T G A C T C G T A C T G A C A T G C T G A C G T A G A T C C G T A C T G A G C A T C G T A C G T A C G A T G C A T G C A T

PB0062.1_Sox12_1/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CTAGAATAAA--
NTTNAGAACAATTA
 A C G T A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T
C A T G C G A T C G A T C A G T C G T A A C T G C T G A G C T A A G T C G C T A C G T A G C A T C G A T C T G A

MF0010.1_Homeobox_class/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:CTAGAATAAA-
----AATAATT
 A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T
A C G T A C G T A C G T A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

PB0186.1_Tcf3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTAGAATAAA--
AGCCGAAAAAAAAAT
 A C G T A C G T A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T
C T G A T A C G A T G C T A G C A C T G C G T A C T G A G C T A G C T A G C T A T G C A G C T A T C G A G C T A G C A T

PB0072.1_Sox5_1/Jaspar

Match Rank:7
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTAGAATAAA-----
TTTAGAACAATAAAAT
 A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T
C G A T G C A T C A G T C T G A C T A G T C G A C G T A A G T C C G T A C G T A G C A T C G T A C T G A C G T A G C T A C G A T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTAGAATAAA------
AGAAGAACAAAGGACTA
 A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0123.1_Foxl1_2/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---CTAGAATAAA---
ATATCAAAACAAAACA
 A C G T A C G T A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T A C G T
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0067.1_Sox18_1/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CTAGAATAAA----
NNTNANAACAATTNNA
 A C G T A C G T A T G C A G C T C G T A A C T G C G T A C T G A G C A T C G T A C G T A G C T A A C G T A C G T A C G T A C G T
C G A T C A G T G C A T C A G T C G T A T C A G C G T A G C T A A G T C G C T A C G T A C G A T C A G T T C A G C G T A T C G A