Information for 1-CAGCTGTNVV (Motif 2)

A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
Reverse Opposite:
A T C G A G T C C T A G G T C A A G T C C G T A A C T G A G T C A C G T A C T G
p-value:1e-22
log p-value:-5.121e+01
Information Content per bp:1.750
Number of Target Sequences with motif144.0
Percentage of Target Sequences with motif15.98%
Number of Background Sequences with motif3157.6
Percentage of Background Sequences with motif6.52%
Average Position of motif in Targets52.8 +/- 25.5bp
Average Position of motif in Background49.8 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.66
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:CAGCTGTNVV
CAGCTGTT--
 A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:2
Score:0.97
Offset:-3
Orientation:forward strand
Alignment:---CAGCTGTNVV
NAHCAGCTGD---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:3
Score:0.96
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTNVV
NNGCAGCTGTT--
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:4
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTNVV
CCAGCTGTTN-
 A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
T G A C G T A C C T G A A C T G T G A C G C A T C A T G A C G T A C G T G C T A A C G T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:5
Score:0.95
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTNVV
ACAGCTGTTV-
 A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
T C G A A G T C C G T A T A C G A T G C A C G T A C T G A G C T A G C T T G C A A C G T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTNVV
NNGCAGCTGTC--
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-CAGCTGTNVV
ACAGCTGTTN-
 A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C G T A G T C A C G T

Myod1/MA0499.1/Jaspar

Match Rank:8
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--CAGCTGTNVV-
TGCAGCTGTCCCT
 A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C A C G T
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---CAGCTGTNVV
CAGCAGCTGN---
 A C G T A C G T A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:10
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-CAGCTGTNVV
GCAGCTGTNN-
 A C G T A G T C C G T A A C T G A G T C A C G T A C T G C A G T G A T C T C A G T A G C
T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T A C G T