Information for 8-CAGGTCCTGGGGG (Motif 12)

A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
Reverse Opposite:
A T G C A G T C A G T C G A T C G T A C C T G A A C T G T A C G T C G A A G T C A G T C A C G T A T C G
p-value:1e-9
log p-value:-2.206e+01
Information Content per bp:1.773
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.22%
Number of Background Sequences with motif174.9
Percentage of Background Sequences with motif0.36%
Average Position of motif in Targets51.7 +/- 25.5bp
Average Position of motif in Background50.2 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:CAGGTCCTGGGGG
-ATGCCCTGAGGC
 A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
A C G T G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGGTCCTGGGGG
-WTGSCCTSAGGS
 A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
A C G T G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C

PB0204.1_Zfp740_2/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CAGGTCCTGGGGG-----
-ANTNCCGGGGGGAANTT
 A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G A C G T A C G T A C G T A C G T A C G T
A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CAGGTCCTGGGGG---
-ATTGCCTGAGGCGAA
 A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G A C G T A C G T A C G T
A C G T C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:5
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CAGGTCCTGGGGG
SDGCAGGTGCNS----
 A C G T A C G T A C G T A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
A T C G C T A G C T A G A G T C C G T A A C T G A C T G A C G T A C T G A T G C G A T C A T G C A C G T A C G T A C G T A C G T

TCF4/MA0830.1/Jaspar

Match Rank:6
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTCCTGGGGG
NNCAGGTGCG-----
 A C G T A C G T A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
G C T A T A C G G A T C C G T A A T C G T A C G A C G T C T A G A G T C C T A G A C G T A C G T A C G T A C G T A C G T

TCF3/MA0522.2/Jaspar

Match Rank:7
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CAGGTCCTGGGGG
NNCAGGTGTN-----
 A C G T A C G T A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:CAGGTCCTGGGGG--
--TGCCCTGAGGGCA
 A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G A C G T A C G T
A C G T A C G T G C A T A T C G A G T C A G T C A G T C A G C T A T C G T C G A T C A G A C T G A C T G A T G C C G T A

SNAI2/MA0745.1/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGGTCCTGGGGG
AACAGGTGT------
 A C G T A C G T A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G
C T G A C T G A G T A C G C T A C T A G C T A G G A C T C A T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGTCCTGGGGG---
-ATTCCCTGAGGGGAA
 A T G C T C G A C T A G C T A G A G C T A T G C A G T C G A C T A C T G C T A G A C T G T C A G A T C G A C G T A C G T A C G T
A C G T C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A