Information for 7-GAAGGCTSGCRBCCYG (Motif 11)

C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
Reverse Opposite:
A G T C C T G A A C T G C T A G T C G A A G T C A T C G A T G C A T C G C T G A A C T G A T G C A G T C A G C T A G C T A G T C
p-value:1e-9
log p-value:-2.220e+01
Information Content per bp:1.700
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.55%
Number of Background Sequences with motif233.5
Percentage of Background Sequences with motif0.48%
Average Position of motif in Targets49.6 +/- 24.2bp
Average Position of motif in Background51.0 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:1
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:GAAGGCTSGCRBCCYG
--TGGCAGNCTGCCAG
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
A C G T A C G T C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GAAGGCTSGCRBCCYG
---NGCTN--------
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAAGGCTSGCRBCCYG
----GCTCGGSCTC--
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
A C G T A C G T A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T A C G T

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAAGGCTSGCRBCCYG
ATAAAGGCGCGCGAT---
 A C G T A C G T C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
C T G A G C A T C G T A G C T A C T G A T A C G A T C G T G A C A T C G A T G C A T C G G A T C T A C G G C T A G C A T A C G T A C G T A C G T

PB0009.1_E2F3_1/Jaspar

Match Rank:5
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--GAAGGCTSGCRBCCYG
ATAAGGGCGCGCGAT---
 A C G T A C G T C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
T C G A G C A T C G T A G C T A C T A G T A C G T A C G T A G C A T C G A T G C A T C G G A T C A T C G G C T A G C A T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:6
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:GAAGGCTSGCRBCCYG
---GGCGCGCT-----
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T A C G T A C G T A C G T A C G T A C G T

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.48
Offset:4
Orientation:reverse strand
Alignment:GAAGGCTSGCRBCCYG
----GGTCCCGCCC--
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
A C G T A C G T A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C A C G T A C G T

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.47
Offset:8
Orientation:forward strand
Alignment:GAAGGCTSGCRBCCYG--
--------ACATCCTGNT
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:9
Score:0.47
Offset:-1
Orientation:forward strand
Alignment:-GAAGGCTSGCRBCCYG
NAACAGCTGG-------
 A C G T C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.46
Offset:1
Orientation:reverse strand
Alignment:GAAGGCTSGCRBCCYG-
-TTGGCANNNTGCCAAG
 C T A G T C G A T C G A C T A G A T C G G T A C A G C T T A G C A T C G A T G C T C A G A G C T A G T C A G T C G A C T A C T G A C G T
A C G T G A C T C A G T A C T G C T A G T G A C G C T A T A G C C G T A T A C G C G A T A C T G G A T C G T A C G T C A C T G A T C A G