Information for 3-KCAGGTCACGTGACGC (Motif 3)

C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
Reverse Opposite:
A T C G T A G C A C T G A G C T A G T C C G T A A T G C C T A G A C G T A C T G G T C A G A T C T A G C A G C T A T C G G T C A
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.744
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 20.2bp
Average Position of motif in Background28.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E-box(bHLH)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:1
Orientation:forward strand
Alignment:KCAGGTCACGTGACGC
-CCGGTCACGTGA---
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A T G C A T G C A T C G T A C G A G C T A G T C G C T A A G T C T C A G G A C T A C T G T C G A A C G T A C G T A C G T

TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer

Match Rank:2
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:KCAGGTCACGTGACGC
--BRGTCACGTGAC--
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C T G C T A G T C A G A G C T T A G C G T C A A G T C T C A G G C A T T A C G T C G A A G T C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:3
Score:0.77
Offset:3
Orientation:reverse strand
Alignment:KCAGGTCACGTGACGC
---GGTCACGTGGC--
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T C T A G C T A G G A C T A G T C C G T A A G T C T C A G C G A T A C T G T C A G A G T C A C G T A C G T

BHLHE41/MA0636.1/Jaspar

Match Rank:4
Score:0.77
Offset:4
Orientation:forward strand
Alignment:KCAGGTCACGTGACGC
----GTCACGTGAC--
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T A C G T T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.76
Offset:3
Orientation:forward strand
Alignment:KCAGGTCACGTGACGC
---GGTCACGTGA---
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T

USF2/MA0526.1/Jaspar

Match Rank:6
Score:0.75
Offset:3
Orientation:reverse strand
Alignment:KCAGGTCACGTGACGC
---GGTCACATGAC--
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:7
Score:0.75
Offset:4
Orientation:forward strand
Alignment:KCAGGTCACGTGACGC
----ATCACGTGAC--
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T A C G T T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

Srebf1(var.2)/MA0829.1/Jaspar

Match Rank:8
Score:0.74
Offset:4
Orientation:forward strand
Alignment:KCAGGTCACGTGACGC
----ATCACGTGAC--
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T A C G T T C G A G C A T G T A C C T G A A T G C T A C G G A C T T A C G G C T A A G T C A C G T A C G T

PB0007.1_Bhlhb2_1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--KCAGGTCACGTGACGC----
NTNNTNGTCACGTGACNNNTNC
 A C G T A C G T C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C A C G T A C G T A C G T A C G T
C T A G G C A T C T G A A G C T C A G T T C A G T A C G C A G T G T A C C T G A A G T C T C A G G A C T A C T G G T C A G A T C A G C T T G A C G C A T C G A T G A T C G A T C

Arntl/MA0603.1/Jaspar

Match Rank:10
Score:0.74
Offset:5
Orientation:reverse strand
Alignment:KCAGGTCACGTGACGC
-----NCACGTGACN-
 C A G T A T G C T C G A A C T G C T A G C A G T A G T C G T C A A G T C A T C G A C G T A C T G C T G A T A G C A T C G A T G C
A C G T A C G T A C G T A C G T A C G T C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T