Information for 3-HCTGATACCAGGA (Motif 2)

G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C A C G T A C T G A C T G A C G T T C G A A G C T A G T C C G T A A C T G C G T A
p-value:1e-13
log p-value:-3.071e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets55.3 +/- 23.9bp
Average Position of motif in Background15.1 +/- 7.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.61
Offset:6
Orientation:reverse strand
Alignment:HCTGATACCAGGA---
------ANCAGGATGT
 G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G T A C G T C A A C T G A C T G C G T A C G A T T A C G A G C T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.59
Offset:0
Orientation:forward strand
Alignment:HCTGATACCAGGA
ACTGAAACCA---
 G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---HCTGATACCAGGA-
ATAAATGACACCTATCA
 A C G T A C G T A C G T G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T
G C T A C A G T C T G A G T C A G C T A A G C T C A T G G T C A A G T C G T C A G T A C A G T C A G C T G T C A A G C T A G T C T C G A

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:HCTGATACCAGGA
-CTGTTGCTAGGS
 G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A
A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:5
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:HCTGATACCAGGA------
----TTTCCTGGAAAGNNN
 G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

PB0057.1_Rxra_1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---HCTGATACCAGGA-
TGTCGTGACCCCTTAAT
 A C G T A C G T A C G T G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T
C A G T A T C G G A C T A G T C C A T G A G C T T C A G G T C A G T A C G T A C A G T C A G T C C G A T G A C T T C G A G T C A A G C T

PB0059.1_Six6_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---HCTGATACCAGGA-
ANANNTGATACCCNATN
 A C G T A C G T A C G T G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

PH0166.1_Six6_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---HCTGATACCAGGA-
AATNTTGATACCCTATN
 A C G T A C G T A C G T G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T
T G C A C T G A C G A T C T G A C G A T C G A T C A T G C G T A G A C T G T C A A G T C G A T C G A T C A G C T G C T A G C A T G A C T

ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer

Match Rank:9
Score:0.53
Offset:6
Orientation:forward strand
Alignment:HCTGATACCAGGA---
------ANCAGGAAGT
 G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A T G A C T A G C T G C A A C T G A C T G C G T A C G T A T C A G G A C T

PB0022.1_Gata5_1/Jaspar

Match Rank:10
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---HCTGATACCAGGA-
TAAACTGATAAGAAGAT
 A C G T A C G T A C G T G C A T A G T C A C G T A C T G C T G A A G C T G T C A A G T C A G T C C G T A C T A G A C T G C G T A A C G T
G C A T C G T A C G T A C T G A A G T C G C A T A C T G C G T A C G A T G C T A C G T A T A C G T C G A T C G A C A T G C G T A C A G T