Information for 9-AGAGCTTCAAAAC (Motif 15)

G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
Reverse Opposite:
T A C G A G C T A G C T A C G T A C G T T A C G T C G A G C T A T C A G A G T C C G A T A T G C C A G T
p-value:1e-8
log p-value:-1.979e+01
Information Content per bp:1.659
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.83%
Number of Background Sequences with motif126.8
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets46.9 +/- 26.9bp
Average Position of motif in Background51.9 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AGAGCTTCAAAAC
-CGGTTTCAAA--
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
A C G T T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:forward strand
Alignment:AGAGCTTCAAAAC
---ACATCAAAGG
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.60
Offset:3
Orientation:forward strand
Alignment:AGAGCTTCAAAAC
---GCTTCC----
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T

TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer

Match Rank:4
Score:0.59
Offset:3
Orientation:forward strand
Alignment:AGAGCTTCAAAAC
---ACWTCAAAGG
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
A C G T A C G T A C G T C G T A A T G C C G A T A C G T A G T C C G T A C G T A C G T A C T A G A T C G

LIN54/MA0619.1/Jaspar

Match Rank:5
Score:0.59
Offset:3
Orientation:reverse strand
Alignment:AGAGCTTCAAAAC
---NATTCAAAT-
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
A C G T A C G T A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:6
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------AGAGCTTCAAAAC
NATTTAAGTACTTNAAA--
 A C G T A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A A C G T A C G T

TCF7L2/MA0523.1/Jaspar

Match Rank:7
Score:0.57
Offset:1
Orientation:forward strand
Alignment:AGAGCTTCAAAAC--
-AAAGATCAAAGGAA
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C A C G T A C G T
A C G T C T G A T C G A C T G A A T C G G C T A C G A T T A G C C G T A T C G A C T G A T C A G T C A G T C G A G T C A

PH0112.1_Nkx2-3/Jaspar

Match Rank:8
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----AGAGCTTCAAAAC
CNTTAAGTACTTAANG--
 A C G T A C G T A C G T A C G T A C G T G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C
G A T C C G T A G A C T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T C G T A T C G A T C G A C T A G A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:forward strand
Alignment:AGAGCTTCAAAAC--
---ACATCAAAGGNA
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAGCTTCAAAAC--
----CTTCACACCTA
 G C T A A T C G G C T A T C A G A G T C C A G T A C G T A G T C G T C A T C G A T C G A C T G A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A