Information for 5-SCAGGRGTTCCAGHCK (Motif 8)

A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
Reverse Opposite:
G T C A A C T G C A G T G T A C C G A T A C T G A C T G C G T A G T C A A G T C A G C T A G T C A G T C C A G T A C T G A T G C
p-value:1e-11
log p-value:-2.648e+01
Information Content per bp:1.776
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.2 +/- 18.6bp
Average Position of motif in Background61.6 +/- 19.7bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:1
Score:0.58
Offset:1
Orientation:forward strand
Alignment:SCAGGRGTTCCAGHCK
-AAGGKGRCGCAGGCA
 A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
A C G T T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.55
Offset:9
Orientation:reverse strand
Alignment:SCAGGRGTTCCAGHCK-
---------CCAGACAG
 A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:SCAGGRGTTCCAGHCK-
-------TTCCCGCCWG
 A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

ZIC1/MA0696.1/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----SCAGGRGTTCCAGHCK
CACAGCGGGGGGTC------
 A C G T A C G T A C G T A C G T A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
T G A C C T G A A G T C T G C A T C A G A G T C C T A G C A T G T C A G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.53
Offset:9
Orientation:reverse strand
Alignment:SCAGGRGTTCCAGHCK---
---------CCAGACRSVB
 A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZIC4/MA0751.1/Jaspar

Match Rank:6
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----SCAGGRGTTCCAGHCK
NCNCAGCGGGGGGTC------
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZIC3/MA0697.1/Jaspar

Match Rank:7
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----SCAGGRGTTCCAGHCK
NCGCAGCGGGGGGTC------
 A C G T A C G T A C G T A C G T A C G T A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
C A T G G T A C C T A G G A T C T G C A T C A G A G T C C T A G A C T G A C T G C A T G C A T G C A T G A G C T T G A C A C G T A C G T A C G T A C G T A C G T A C G T

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:SCAGGRGTTCCAGHCK-
--BCNGGTTCTAGANCN
 A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T A C G T
A C G T A C G T A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:9
Score:0.53
Offset:6
Orientation:reverse strand
Alignment:SCAGGRGTTCCAGHCK
------ATGCCAGACN
 A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
A C G T A C G T A C G T A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

TCF3/MA0522.2/Jaspar

Match Rank:10
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-SCAGGRGTTCCAGHCK
NNCAGGTGTN-------
 A C G T A T C G A G T C G C T A A C T G C T A G T C G A A C T G A C G T A C G T A G T C A G T C C G T A A C T G G T A C A G T C C A G T
G T C A T C A G A G T C C G T A A T C G T A C G C G A T A C T G A G C T C A G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T