Information for 5-CCTACGGCBT (Motif 6)

A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
Reverse Opposite:
C G T A T G C A T C A G G T A C T A G C C A T G A G C T C G T A A C T G T A C G
p-value:1e-11
log p-value:-2.687e+01
Information Content per bp:1.653
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.67%
Number of Background Sequences with motif607.8
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets48.2 +/- 25.5bp
Average Position of motif in Background48.3 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCTACGGCBT
NGCCTNAGGCN-
 A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
G C A T A T C G A T G C A G T C A G C T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:2
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--CCTACGGCBT
TGCCTGAGGCN-
 A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:forward strand
Alignment:--CCTACGGCBT
CGCCTCAGGCA-
 A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A A C G T

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:4
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----CCTACGGCBT-
NTNGCCTCAGGCNNN
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T A C G T
G C T A C A G T G A C T A T C G A G T C A G T C A G C T T A G C T C G A T C A G A C T G T A G C C G T A C G T A C G A T

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----CCTACGGCBT
ATGCCCTGAGGC--
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
G C T A C G A T C A T G A T G C A G T C A G T C G A C T T A C G T C G A C T A G A C T G T A G C A C G T A C G T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CCTACGGCBT-
ANTGCCTGAGGCAAN
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:7
Score:0.72
Offset:-4
Orientation:reverse strand
Alignment:----CCTACGGCBT
WTGSCCTSAGGS--
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
G C T A G A C T C A T G A T G C A G T C A G T C G A C T T A C G C T G A C T A G A C T G T A G C A C G T A C G T

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:8
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCTACGGCBT-
ATTGCCTGAGGCGAA
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T A C G T
C G T A G C A T G A C T A T C G G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A G C C T A G G C T A C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CCTACGGCBT-
ATTCCCTGAGGGGAA
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.66
Offset:-4
Orientation:reverse strand
Alignment:----CCTACGGCBT
NTGCCCANNGGTNA
 A C G T A C G T A C G T A C G T A T G C T G A C G C A T T C G A G T A C A C T G A C T G A G T C A C G T G C A T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A