Information for 3-TCGGAATGCC (Motif 3)

A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C
Reverse Opposite:
C A T G T A C G T G A C G C T A C A G T A C G T A T G C T A G C T C A G T G C A
p-value:1e-13
log p-value:-3.171e+01
Information Content per bp:1.606
Number of Target Sequences with motif146.0
Percentage of Target Sequences with motif16.63%
Number of Background Sequences with motif4156.9
Percentage of Background Sequences with motif8.60%
Average Position of motif in Targets49.4 +/- 25.7bp
Average Position of motif in Background50.2 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD3/MA0808.1/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TCGGAATGCC
-TGGAATGT-
 A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C
A C G T G C A T C T A G A C T G G C T A C G T A A C G T A C T G G A C T A C G T

REL/MA0101.1/Jaspar

Match Rank:2
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:TCGGAATGCC--
--GGAAANCCCC
 A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C A C G T A C G T
A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:3
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-TCGGAATGCC
CCWGGAATGY-
 A C G T A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C
T A G C T A G C G C A T C A T G A C T G G C T A C G T A A C G T A C T G G A T C A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCGGAATGCC
NCTGGAATGC-
 A C G T A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T

HIC2/MA0738.1/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:forward strand
Alignment:TCGGAATGCC----
-----ATGCCCACC
 A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C

TEAD4/MA0809.1/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCGGAATGCC
NTGGAATGTN
 A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G

TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TCGGAATGCC
CCWGGAATGY-
 A C G T A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C
A T G C G A T C C G A T C T A G A C T G G C T A C G T A A G C T A C T G A G C T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.63
Offset:5
Orientation:forward strand
Alignment:TCGGAATGCC----
-----ATGCCAACC
 A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TCGGAATGCC-
GGGGGAATCCCC
 A C G T A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:TCGGAATGCC---
-GGGAAATCCCCN
 A C G T A G T C A T C G T A C G T G C A G T C A C G A T A C T G A T G C G T A C A C G T A C G T A C G T
A C G T C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T