Information for 12-CCCAACGAGC (Motif 19)

A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C
Reverse Opposite:
A C T G A G T C A C G T A T G C A T C G A C G T A C G T C T A G A T C G A C T G
p-value:1e-6
log p-value:-1.554e+01
Information Content per bp:1.933
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.37%
Number of Background Sequences with motif91.2
Percentage of Background Sequences with motif0.19%
Average Position of motif in Targets42.7 +/- 26.6bp
Average Position of motif in Background47.4 +/- 26.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCCAACGAGC-----
TGGACCAATCAGCACTCT
 A C G T A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:2
Score:0.59
Offset:6
Orientation:forward strand
Alignment:CCCAACGAGC-
------CAGCC
 A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

NFYB/MA0502.1/Jaspar

Match Rank:3
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CCCAACGAGC
AAATGGACCAATCAG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:4
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCCAACGAGC
AGCCAATCGG-
 A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C
T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G A C G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CCCAACGAGC---
TCCCAGMCRAGCCCC
 A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T A C G T A C G T
A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CCCAACGAGC-
ATTTCCCAGVAKSCY
 A C G T A C G T A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

TFAP2A(var.3)/MA0872.1/Jaspar

Match Rank:7
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCCAACGAGC-
TGCCCNNAGGGCA
 A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T A G C T C G A T C A G A C T G A C T G A T G C C G T A

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CCCAACGAGC----
ACCCCTAATTAGCGGTG
 A C G T A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T A C G T A C G T A C G T
G C T A T G A C T G A C T G A C T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A G T C C A T G C A T G A C G T C T A G

PB0133.1_Hic1_2/Jaspar

Match Rank:9
Score:0.53
Offset:-7
Orientation:forward strand
Alignment:-------CCCAACGAGC
GGGTGTGCCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G A C G T

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--CCCAACGAGC-
TGCCCTNAGGGCA
 A C G T A C G T A G T C A T G C A G T C C G T A C G T A A T G C A T C G C G T A A C T G A G T C A C G T
G C A T A T C G A G T C A G T C A G T C A G C T T G A C T C G A T C A G A C T G A C T G A T G C C G T A