Information for 12-CTGGCACGGTGCC (Motif 18)

G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C
Reverse Opposite:
A T C G A T C G A T G C G C T A A T G C A G T C T A C G C A G T A T C G T G A C T A G C G T C A C T A G
p-value:1e-9
log p-value:-2.140e+01
Information Content per bp:1.668
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.76%
Number of Background Sequences with motif515.2
Percentage of Background Sequences with motif1.08%
Average Position of motif in Targets51.8 +/- 25.5bp
Average Position of motif in Background52.2 +/- 29.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.82
Offset:-1
Orientation:forward strand
Alignment:-CTGGCACGGTGCC--
CTTGGCANNNTGCCAA
 A C G T G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C A C G T A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:2
Score:0.79
Offset:0
Orientation:forward strand
Alignment:CTGGCACGGTGCC-
CTGGCAGNCTGCCA
 G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:CTGGCACGGTGCC-
TTGGCATGGTGCCA
 G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C A C G T
G A C T A C G T A C T G A C T G A G T C C G T A G A C T A T C G A T C G C A G T A C T G A G T C A G T C C G T A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.68
Offset:-4
Orientation:forward strand
Alignment:----CTGGCACGGTGCC---
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C A C G T A C G T A C G T
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CTGGCACGGTGCC----
-TGACCCAGTGACCTAC
 G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C A C G T A C G T A C G T A C G T
A C G T G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCACGGTGCC
NTTGGCANN-----
 A C G T G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T A C G T A C G T

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTGGCACGGTGCC---
-GGTCANNGTGACCTN
 G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C A C G T A C G T A C G T
A C G T C A T G C T A G C A G T A G T C C G T A A T G C T A C G T A C G G C A T T C A G G T C A G A T C G T A C G A C T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:CTGGCACGGTGCC
TTGGCA-------
 G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Hic1/MA0739.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CTGGCACGGTGCC
GGTTGGCAT------
 A C G T A C G T G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGGCACGGTGCC
CTTGGCAA------
 A C G T G A T C A C G T A T C G A C T G A T G C G T C A A G T C T C A G A T C G C G A T A T C G T A G C T A G C
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T