Information for 5-CAATGATWMTGGY (Motif 6)

A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
Reverse Opposite:
C T A G A G T C A G T C C G T A A C T G C G A T C G T A A C G T A T G C C G T A A C G T A C G T A C T G
p-value:1e-13
log p-value:-3.076e+01
Information Content per bp:1.883
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets45.8 +/- 30.3bp
Average Position of motif in Background90.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox1/MA0870.1/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CAATGATWMTGGY
AACAATGNTATTGTT
 A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
T C G A C T G A A G T C C T G A G T C A A C G T T A C G A G C T G C A T C G T A A C G T C A G T A C T G C G A T A C G T

MF0010.1_Homeobox_class/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CAATGATWMTGGY
-AATAATT-----
 A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T A C G T A C G T A C G T A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAATGATWMTGGY
GACAATGNN------
 A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
T A C G G T C A A G T C C G T A C T G A C G A T C T A G C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0197.1_Zfp105_2/Jaspar

Match Rank:4
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CAATGATWMTGGY
ATGGTTCAATAATTTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
C T A G A G C T C A T G T A C G A C G T A G C T T G A C T G C A T G C A A G C T T C G A C G T A A G C T C A G T A G C T A C G T C T A G A C G T A C G T

SOX21/MA0866.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CAATGATWMTGGY
AACAATGGTAGTGTT
 A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

PB0079.1_Sry_1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CAATGATWMTGGY-
TATAATTATAATATTC
 A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C A C G T
A C G T G C T A C A G T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C T G A C G A T C A G T T G A C

PB0069.1_Sox21_1/Jaspar

Match Rank:7
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CAATGATWMTGGY-
NNTAATTATAATNANN
 A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C A C G T
G T A C G C A T G C A T G C T A C G T A C G A T C G A T C T G A G A C T C G T A C G T A C G A T C G A T C G T A C G T A C G T A

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CAATGATWMTGGY
CCAATCAA------
 A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

PB0064.1_Sox14_1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAATGATWMTGGY-
GCTAATTATAATTATC
 A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C A C G T
C A T G G A T C G A C T G C T A G C T A C G A T C G A T C T G A G A C T C G T A G C T A C G A T C G A T C G T A C A G T G T A C

PB0070.1_Sox30_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------CAATGATWMTGGY
AATGAACAATGGAATT---
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C G T A T C G C G T A A C G T C G T A G T A C A C G T C T A G C T A G A G T C
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T A C G T A C G T A C G T