Information for 11-CCAAGCCATA (Motif 27)

A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A
Reverse Opposite:
C G A T C G T A G A C T A C T G C T A G A G T C C A G T A C G T A C T G A C T G
p-value:1e-6
log p-value:-1.558e+01
Information Content per bp:1.856
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif59.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets45.2 +/- 20.2bp
Average Position of motif in Background48.4 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf12/MA0742.1/Jaspar

Match Rank:1
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCAAGCCATA---
GACCACGCCCTTATT
 A C G T A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A A C G T A C G T A C G T
C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

PB0098.1_Zfp410_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGCCATA---
NNNTCCATCCCATAANN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A A C G T A C G T A C G T
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A

PB0180.1_Sp4_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CCAAGCCATA-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

ZNF410/MA0752.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCAAGCCATA------
TCCATCCCATAATACTC
 A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T G A C G A T C G C T A C A G T G T A C G T A C A T G C G T C A A G C T G T C A T C G A G A C T C T G A G T A C A G C T G T A C

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCAAGCCATA
TGCCAA------
 A C G T A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCAAGCCATA
ATCACCCCAT-
 A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A
T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CCAAGCCATA
GCCMCRCCCH-
 A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A
C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:8
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----CCAAGCCATA
CGTGCCAAG-----
 A C G T A C G T A C G T A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CCAAGCCATA
AGCGCGCC---
 A C G T A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

NEUROD2/MA0668.1/Jaspar

Match Rank:10
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CCAAGCCATA----
----GCCATATGGT
 A G T C A G T C C G T A G T C A C T A G A G T C A G T C C T G A A C G T C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T