Information for 6-TGCCCTCTAG (Motif 24)

G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G
Reverse Opposite:
G A T C G A C T T C G A T C A G G C T A C T A G C T A G T A C G T G A C C T G A
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.457
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif4.74%
Number of Background Sequences with motif795.7
Percentage of Background Sequences with motif1.64%
Average Position of motif in Targets47.1 +/- 26.1bp
Average Position of motif in Background49.2 +/- 26.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.02
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:TGCCCTCTAG
TGACCYCT--
 G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G
A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:2
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGCCCTCTAG------
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCTCTAG
CTGACCTTTG-
 A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TGCCCTCTAG
TGACCTYA--
 G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TGCCCTCTAG--
NNNNTGACCTTTNNNN
 A C G T A C G T A C G T A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G A C G T A C G T
A G T C C G A T A T G C C A T G A G C T T C A G G T C A G T A C G T A C A G C T A G C T G C A T C A T G T C G A C A T G G T C A

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCTAG
CTGCCCGCA--
 A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------TGCCCTCTAG----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:8
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGCCCTCTAG------
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G A C G T A C G T A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TGCCCTCTAG--
NNNGTGACCTTTGNNN
 A C G T A C G T A C G T A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G A C G T A C G T
G T A C C G T A A T C G C T A G A G C T T C A G G T C A G T A C G T A C A G C T A G C T C G A T C A T G T C G A C A T G G T C A

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-TGCCCTCTAG
ATGCCCACC--
 A C G T G A C T A C T G A T G C G A T C G A T C C G A T A G T C A G C T C T G A C T A G
T C G A A G C T T C A G T G A C G T A C G T A C T C G A T A G C A G T C A C G T A C G T