Information for 15-ATTTACAGAGVAG (Motif 23)

C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A C G T A T G C A C G T C A T G A C G T C T G A C G T A C T G A A G C T
p-value:1e-8
log p-value:-2.011e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif11.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.9 +/- 17.5bp
Average Position of motif in Background48.6 +/- 20.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxa2/MA0047.2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATTTACAGAGVAG
TGTTTACTTAGG--
 A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G
A C G T C T A G A C G T A C G T A C G T T C G A A G T C G C A T A G C T C G T A C A T G A T C G A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATTTACAGAGVAG
ATATTTACATA----
 A C G T A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G
C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A A C G T A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--ATTTACAGAGVAG-
AAACAGACAAAGGAAT
 A C G T A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----ATTTACAGAGVAG
BSNTGTTTACWYWGN--
 A C G T A C G T A C G T A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G
A G T C T A G C G A C T A C G T C T A G A C G T A C G T A C G T C T G A A G T C G C T A G A C T C G T A C T A G A C T G A C G T A C G T

PH0158.1_Rhox11_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ATTTACAGAGVAG-
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:ATTTACAGAGVAG
----ACAAAG---
 C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G
A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTTACAGAGVAG-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ATTTACAGAGVAG-
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ATTTACAGAGVAG----
--CCACACAGCAGGAGA
 C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:ATTTACAGAGVAG----
-----CACAGCAGGGGG
 C T G A A G C T C G A T A G C T C G T A G A T C C G T A A T C G C G T A A C T G T A G C C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G