Information for 4-CTCCTCCCCC (Motif 20)

A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C
Reverse Opposite:
T C A G C T A G C T A G A T C G C A T G G T C A T C A G T A C G C T G A T A C G
p-value:1e-9
log p-value:-2.236e+01
Information Content per bp:1.694
Number of Target Sequences with motif102.0
Percentage of Target Sequences with motif11.79%
Number of Background Sequences with motif2937.1
Percentage of Background Sequences with motif6.06%
Average Position of motif in Targets48.4 +/- 26.3bp
Average Position of motif in Background50.0 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP1/MA0079.3/Jaspar

Match Rank:1
Score:0.85
Offset:-1
Orientation:forward strand
Alignment:-CTCCTCCCCC
GCCCCGCCCCC
 A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:2
Score:0.85
Offset:-1
Orientation:reverse strand
Alignment:-CTCCTCCCCC-
GCTCCGCCCMCY
 A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C A C G T
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:CTCCTCCCCC--
CCCCTCCCCCAC
 A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C A C G T A C G T
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C

POL003.1_GC-box/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---CTCCTCCCCC-
NAGCCCCGCCCCCN
 A C G T A C G T A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

EGR1/MA0162.2/Jaspar

Match Rank:5
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-CTCCTCCCCC---
CCCCCGCCCCCGCC
 A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C A C G T A C G T A C G T
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--CTCCTCCCCC
CNGTCCTCCC--
 A C G T A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-CTCCTCCCCC
GCCCCGCCCC-
 A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C
A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C A C G T

PB0202.1_Zfp410_2/Jaspar

Match Rank:8
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CTCCTCCCCC----
TCACCCCGCCCCAAATT
 A C G T A C G T A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C A C G T A C G T A C G T A C G T
A G C T G A T C G T C A A G T C G A T C A G T C A G T C A C T G T G A C A G T C T G A C A T G C C G A T G C T A G T C A G A C T G C A T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.74
Offset:-3
Orientation:forward strand
Alignment:---CTCCTCCCCC--
NRGCCCCRCCCHBNN
 A C G T A C G T A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C A C G T A C G T
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--CTCCTCCCCC
GGCCCCGCCCCC
 A C G T A C G T A T G C G A C T A T G C A G T C C A G T G T A C T A G C G A T C G A T C A G T C
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C