Information for 5-CTCCGAAAAC (Motif 9)

A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T A C G T A G T C A C T G C T A G C G T A C T A G
p-value:1e-12
log p-value:-2.768e+01
Information Content per bp:1.882
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif23.7
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets69.2 +/- 24.4bp
Average Position of motif in Background46.5 +/- 30.3bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0034.1_Irf4_1/Jaspar

Match Rank:1
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--CTCCGAAAAC---
CGTATCGAAACCAAA
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T A C G T A C G T
T G A C C T A G C G A T C G T A G A C T A G T C C T A G T C G A C G T A C G T A T A G C G A T C C T G A G T C A C G T A

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:CTCCGAAAAC-
-ACTGAAACCA
 A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CTCCGAAAAC-----
CTGATCGAAACCAAAGT
 A C G T A C G T A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T A C G T A C G T A C G T A C G T
G T A C C G A T C A T G C T G A G A C T G A T C C T A G T C G A C G T A C G T A T A G C A G T C T C G A T G C A C G T A C A T G C G A T

PB0035.1_Irf5_1/Jaspar

Match Rank:4
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---CTCCGAAAAC--
ATAAACCGAAACCAA
 A C G T A C G T A C G T A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T A C G T
C G T A C G A T C T G A C G T A C T G A G A T C G A T C C T A G C T G A C G T A C G T A T A G C G A T C C T G A T C G A

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCCGAAAAC
GCTCCG-----
 A C G T A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:6
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCCGAAAAC------
--TCGAAACCGAAACT
 A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T G A T C C T A G G T C A C G T A C G T A T A G C G A T C A C T G C T G A C G T A G T C A A T G C G A C T

HOXC13/MA0907.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCCGAAAAC
GCTCGTAAAAA
 A C G T A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCCGAAAAC-
-RCCGGAARYN
 A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T
A C G T T C G A T A G C T G A C C T A G C A T G G C T A G C T A T C A G G A C T C T A G

IRF7/MA0772.1/Jaspar

Match Rank:9
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CTCCGAAAAC------
--ACGAAAGCGAAAGT
 A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A T G A C A C T G T G C A C G T A G T C A T C A G G A T C C T A G G T C A T C G A G C T A T C A G G C A T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CTCCGAAAAC-
-TTTGAAACCG
 A G T C A C G T A G T C A G T C A C T G C G T A C G T A G T C A G T C A A G T C A C G T
A C G T A C G T A C G T A C G T T A C G C G T A C T G A C G T A G T A C A G T C A T C G