Information for 13-TTTCATAAAC (Motif 24)

A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C
Reverse Opposite:
A C T G A C G T A C G T A C G T C G T A A C G T A C T G C G T A C G T A C G T A
p-value:1e-6
log p-value:-1.492e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.5 +/- 24.0bp
Average Position of motif in Background71.2 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIL3/MA0025.1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTCATAAAC
ANGTTACATAA--
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C
C G T A A G C T T C A G A G C T A C G T C G T A A G T C C T G A C G A T G T C A C G T A A C G T A C G T

HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer

Match Rank:2
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTTCATAAAC
VTTRCATAAY-
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C
T C A G G A C T A C G T C T G A G A T C T C G A G A C T G T C A C T G A A G T C A C G T

MF0006.1_bZIP_cEBP-like_subclass/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-TTTCATAAAC
ATTGCATAA--
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C
T C G A G A C T A C G T C T A G G A T C T C G A G A C T G T C A G C T A A C G T A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:4
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TTTCATAAAC--
WWATRTAAACAN
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TTTCATAAAC--
NGYCATAAAWCH
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

HOXC10/MA0905.1/Jaspar

Match Rank:6
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TTTCATAAAC-
-GTCGTAAAAT
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T T C A G G A C T G T A C C T A G C G A T G C T A C G T A C G T A G C T A G C A T

CEBPA/MA0102.3/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TTTCATAAAC
ATTGCACAATA
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C
T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

Foxq1/MA0040.1/Jaspar

Match Rank:8
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:TTTCATAAAC----
---AATAAACAATN
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTTCATAAAC
-GCAATAAAA
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C
A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TTTCATAAAC-
-GTCATAAAAN
 A C G T A C G T A C G T A G T C C G T A A C G T C G T A C G T A C G T A A G T C A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T