Information for 8-AARKRTCMACTGR (Motif 18)

C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
Reverse Opposite:
A G T C G T A C C G T A A T C G A C G T A C G T A C T G C G T A A G T C G T C A A G C T A C G T A C G T
p-value:1e-8
log p-value:-2.006e+01
Information Content per bp:1.839
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif6.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.0 +/- 22.7bp
Average Position of motif in Background45.2 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NR2F1/MA0017.2/Jaspar

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AARKRTCMACTGR
CAAAGGTCAAGGG-
 A C G T C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AARKRTCMACTGR
TCTCAAAGGTCACGAG-
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----AARKRTCMACTGR
TCTCAAAGGTCACCTG-
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----AARKRTCMACTGR
ANGNAAAGGTCA-----
 A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AARKRTCMACTGR----
-AANTTCAAGTGGCTTN
 C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A

ZNF354C/MA0130.1/Jaspar

Match Rank:6
Score:0.61
Offset:4
Orientation:forward strand
Alignment:AARKRTCMACTGR
----ATCCAC---
 C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AARKRTCMACTGR----
-AATTTCAAGTGGCTTN
 C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

PH0111.1_Nkx2-2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AARKRTCMACTGR----
NANTTTCAAGTGGTTAN
 C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G A C G T A C G T A C G T A C G T
G C T A T G C A G C A T G C A T A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G A T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AARKRTCMACTGR
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

NR1H2::RXRA/MA0115.1/Jaspar

Match Rank:10
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------AARKRTCMACTGR
AAAGGTCAAAGGTCAAC---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C T G A C A G T C T A G A C G T A G T C G T C A C G T A A T G C C G A T A C T G C T A G
G T C A C T G A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A C G T A A T G C A C G T A C G T A C G T