Information for 7-ACAAAWGTTAACT (Motif 16)

C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
Reverse Opposite:
C G T A A C T G A C G T A C G T C G T A C G T A A G T C C G T A A C G T C G A T A C G T A C T G A G C T
p-value:1e-9
log p-value:-2.284e+01
Information Content per bp:1.833
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.16%
Number of Background Sequences with motif27.3
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets47.4 +/- 21.5bp
Average Position of motif in Background53.6 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox3/MA0514.1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAWGTTAACT
AAAACAAAGG------
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAWGTTAACT
RACAAWGG------
 A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAWGTTAACT
RNAACAATGG------
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACAAAWGTTAACT
AGAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------ACAAAWGTTAACT
ATAAGAACAAAGGACTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAWGTTAACT
AACAAAGG------
 A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAWGTTAACT
VRRACAAWGG------
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-ACAAAWGTTAACT
AACAAT--------
 A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T C G A C G T A G A T C C T G A T G C A C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACAAAWGTTAACT
RAACAATGGN-----
 A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T A C G T A C G T A C G T

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---ACAAAWGTTAACT
GGAACAAAGR------
 A C G T A C G T A C G T C T G A A G T C C G T A C G T A C G T A C G A T C T A G G A C T C G A T G T C A G T C A A G T C C G A T
T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T A C G T A C G T A C G T A C G T A C G T