Information for 9-TGGCATTCTT (Motif 15)

A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
Reverse Opposite:
G C T A C T G A T A C G G T C A G C T A A C G T A C T G A G T C A G T C G T C A
p-value:1e-10
log p-value:-2.366e+01
Information Content per bp:1.826
Number of Target Sequences with motif23.0
Percentage of Target Sequences with motif2.67%
Number of Background Sequences with motif224.3
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets50.3 +/- 22.3bp
Average Position of motif in Background50.2 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hic1/MA0739.1/Jaspar

Match Rank:1
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATTCTT
GGTTGGCAT----
 A C G T A C G T A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATTCTT
NTTGGCANN---
 A C G T A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TGGCATTCTT
TTGGCA-----
 A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T A C G T A C G T A C G T

TEAD4/MA0809.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TGGCATTCTT-
-CACATTCCAT
 A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T A C G T
A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

NFIA/MA0670.1/Jaspar

Match Rank:5
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATTCTT
NNTTGGCANN---
 A C G T A C G T A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------TGGCATTCTT
NGTAGGTTGGCATNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T A C G T

HIC2/MA0738.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGGCATTCTT
NGTGGGCAT----
 A C G T A C G T A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T A C G T A C G T A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:TGGCATTCTT--
--RCATTCCWGG
 A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T A C G T A C G T
A C G T A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--TGGCATTCTT
CTTGGCAA----
 A C G T A C G T A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T
A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A A C G T A C G T A C G T A C G T

TEAD1/MA0090.2/Jaspar

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGGCATTCTT-
-CACATTCCAT
 A C G T A C T G T C A G G T A C G T C A C G A T A C G T A T G C G A C T C G A T A C G T
A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T