Motif 12

Information for 6-AGCCCCGCAGCCA (Motif 12)

Reverse Opposite:

p-value:	1e-10
log p-value:	-2.492e+01
Information Content per bp:	1.924
Number of Target Sequences with motif	5.0
Percentage of Target Sequences with motif	0.58%
Number of Background Sequences with motif	0.0
Percentage of Background Sequences with motif	0.00%
Average Position of motif in Targets	58.4 +/- 13.1bp
Average Position of motif in Background	0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)	0.6
Multiplicity (# of sites on avg that occur together)	1.00
Motif File:	file (matrix) reverse opposite
SVG Files for Logos:	forward logo reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:	1
Score:	0.62
Offset:	0
Orientation:	forward strand
Alignment:	AGCCCCGCAGCCA GGCCCCGCCCCC-

SP1/MA0079.3/Jaspar

Match Rank:	2
Score:	0.56
Offset:	1
Orientation:	forward strand
Alignment:	AGCCCCGCAGCCA -GCCCCGCCCCC-

SP2/MA0516.1/Jaspar

Match Rank:	3
Score:	0.56
Offset:	1
Orientation:	forward strand
Alignment:	AGCCCCGCAGCCA--- -GCCCCGCCCCCTCCC

PB0024.1_Gcm1_1/Jaspar

Match Rank:	4
Score:	0.56
Offset:	-2
Orientation:	forward strand
Alignment:	--AGCCCCGCAGCCA- TCGTACCCGCATCATT

SP4/MA0685.1/Jaspar

Match Rank:	5
Score:	0.55
Offset:	-2
Orientation:	forward strand
Alignment:	--AGCCCCGCAGCCA-- TAAGCCACGCCCCCTTT

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:	6
Score:	0.55
Offset:	1
Orientation:	forward strand
Alignment:	AGCCCCGCAGCCA -TGCCCCCGGGCA

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:	7
Score:	0.54
Offset:	2
Orientation:	forward strand
Alignment:	AGCCCCGCAGCCA- --CCCCTCCCCCAC

GCM2/MA0767.1/Jaspar

Match Rank:	8
Score:	0.54
Offset:	1
Orientation:	reverse strand
Alignment:	AGCCCCGCAGCCA -TACCCGCATN--

POL003.1_GC-box/Jaspar

Match Rank:	9
Score:	0.54
Offset:	-1
Orientation:	reverse strand
Alignment:	-AGCCCCGCAGCCA NAGCCCCGCCCCCN

TFAP2B(var.3)/MA0813.1/Jaspar

Match Rank:	10
Score:	0.54
Offset:	0
Orientation:	forward strand
Alignment:	AGCCCCGCAGCCA TGCCCTGAGGGCA