Information for 4-GACGTGACGT (Motif 2)

A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
Reverse Opposite:
C T G A T A G C T C A G A C G T A T G C C T G A A T G C C T A G G A C T A T G C
p-value:1e-30
log p-value:-7.009e+01
Information Content per bp:1.665
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif8.65%
Number of Background Sequences with motif798.3
Percentage of Background Sequences with motif1.75%
Average Position of motif in Targets47.1 +/- 24.9bp
Average Position of motif in Background50.7 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.15
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRE(bZIP)/Promoter/Homer

Match Rank:1
Score:0.76
Offset:-4
Orientation:forward strand
Alignment:----GACGTGACGT
CGGTGACGTCAC--
 A C G T A C G T A C G T A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
A T G C A T C G T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C A C G T A C G T

USF1/MA0093.2/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GACGTGACGT
GCCACGTGACC-
 A C G T A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
T C A G A G T C G T A C C G T A A G T C T C A G A C G T A C T G C T G A A G T C G A T C A C G T

Arntl/MA0603.1/Jaspar

Match Rank:3
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGACGT
NCACGTGACN-
 A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
C T A G G T A C C T G A A G T C T C A G C G A T A C T G G T C A A G T C G T A C A C G T

Pax2/MA0067.1/Jaspar

Match Rank:4
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GACGTGACGT
-NCGTGACN-
 A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:5
Score:0.74
Offset:4
Orientation:forward strand
Alignment:GACGTGACGT
----TGACGT
 A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
A C G T A C G T A C G T A C G T A C G T C A T G C G T A A G T C A C T G G A C T

BHLHE41/MA0636.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GACGTGACGT
GTCACGTGAC--
 A C G T A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
T C A G C A G T T A G C T C G A A G T C T C A G C G A T T A C G G T C A A G T C A C G T A C G T

Atf1/MA0604.1/Jaspar

Match Rank:7
Score:0.73
Offset:3
Orientation:forward strand
Alignment:GACGTGACGT-
---ATGACGTA
 A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T A C G T
A C G T A C G T A C G T T C G A G C A T A C T G C G T A A G T C C T A G G A C T T C G A

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GACGTGACGT
GTCATGTGACC-
 A C G T A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
T C A G A G C T A G T C C G T A A G C T A C T G A C G T A C T G T C G A A G T C G A T C A C G T

TFEB/MA0692.1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GACGTGACGT
ATCACGTGAC--
 A C G T A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T
T C G A A G C T G T A C G T C A A G T C T C A G G C A T A C T G T G C A A G T C A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GACGTGACGT-
TCACGTGACCGG
 A C G T A T C G C T G A G A T C T A C G A G C T A T C G C G T A A G T C A T C G G A C T A C G T
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G