Information for 12-TTTTGGCTCC (Motif 11)

A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C
Reverse Opposite:
A T C G T A C G C T G A C A T G A G T C A G T C C T G A C T G A C G T A C G T A
p-value:1e-9
log p-value:-2.169e+01
Information Content per bp:1.826
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif144.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets52.7 +/- 26.8bp
Average Position of motif in Background48.2 +/- 37.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0112.1_E2F2_2/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
T A G C T G A C A G C T A G C T C A G T G A C T C T A G A T C G G T A C A C T G T A G C G A T C C T A G G C T A T C G A A T C G C A T G

E2F1/MA0024.3/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:TTTTGGCTCC---
-TTTGGCGCCAAA
 A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C A C G T A C G T A C G T
A C G T G C A T C G A T C A G T T C A G A T C G A T G C C T A G A T G C A T G C G C T A G C T A C G T A

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.66
Offset:5
Orientation:forward strand
Alignment:TTTTGGCTCC-
-----GCTCCG
 A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G

PB0113.1_E2F3_2/Jaspar

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--TTTTGGCTCC-----
NNNNTTGGCGCCGANNN
 A C G T A C G T A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C A C G T A C G T A C G T A C G T A C G T
T A C G T A G C A C G T G A C T A C G T G C A T C T A G A T C G G T A C A C T G A T G C A G T C C T A G G C T A C T A G A T G C C A G T

ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGGCTCC--
WCATTTTGKCCTCYT
 A C G T A C G T A C G T A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C A C G T A C G T
C G T A G A T C C T G A A C G T A C G T A C G T C A G T C T A G A C G T G T A C G T A C G A C T A G T C G A T C A C G T

NFIX/MA0671.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TTTTGGCTCC
-NTTGGCANN
 A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:7
Score:0.64
Offset:2
Orientation:forward strand
Alignment:TTTTGGCTCC
--TTGGCA--
 A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C
A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T A C G T

E2F(E2F)/Hela-CellCycle-Expression/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCTCC--
TTTTCGCGCGAA
 A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C A C G T A C G T
G A C T A G C T A G C T A G C T A T G C A T C G A G T C A C T G A T G C A T C G T C G A T C G A

NFIA/MA0670.1/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCTCC
NNTTGGCANN
 A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:10
Score:0.57
Offset:-8
Orientation:forward strand
Alignment:--------TTTTGGCTCC
NNTGTTTATTTTGGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T A G C T A G C T T C A G T C A G G T A C A G C T A T G C A T G C
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T A C G T