Information for 4-CCAGCAATAA (Motif 8)

A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A
Reverse Opposite:
A G C T C G A T G T C A A C G T C G A T A C T G A G T C A G C T A C T G A C T G
p-value:1e-10
log p-value:-2.483e+01
Information Content per bp:1.859
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.11%
Number of Background Sequences with motif20.5
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets44.8 +/- 21.2bp
Average Position of motif in Background50.0 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hmx1/MA0896.1/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA------
ACAAGCAATTAATGAAT
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

PH0041.1_Hmx1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA------
ACAAGCAATTAATGAAT
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T G C A T A G C T G C A C T G A T C A G G A T C C T G A G T C A A C G T G A C T C G T A C G T A C G A T T A C G T G C A C G T A A C G T

Hmx3/MA0898.1/Jaspar

Match Rank:3
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA------
ACAAGCAATTAAAGAAT
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0043.1_Hmx3/Jaspar

Match Rank:4
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA------
ACAAGCAATTAAAGAAT
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A A T G C T G C A T C G A C A T G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A C T A G T C G A C G T A C A G T

PH0063.1_Hoxb8/Jaspar

Match Rank:5
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA-----
ACCGGCAATTAATAAA
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T
G C T A T A G C A G T C C A T G C T A G G A T C G T C A C G T A C G A T G C A T C G T A G C T A G A C T G T C A C T G A C G T A

Hmx2/MA0897.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA------
ACAAGCAATTAAAGAAT
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

PH0042.1_Hmx2/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCAGCAATAA------
ACAAGCAATTAAAGAAT
 A C G T A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T
T C G A T A G C T G C A C T G A T C A G G A T C C T G A G T C A C G A T G A C T C G T A C G T A G C T A T C A G T C G A C T G A C A G T

CDX2/MA0465.1/Jaspar

Match Rank:8
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCAGCAATAA--
-AAGCCATAAAA
 A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T
A C G T T C G A C T G A T C A G A G T C G T A C C G T A A C G T C G T A C G T A C G T A T C G A

CDX1/MA0878.1/Jaspar

Match Rank:9
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCAGCAATAA--
---GCAATAAAA
 A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T
A C G T A C G T A C G T T C A G G A T C G T C A T C G A G C A T G C T A C G T A G C T A G T C A

HOXA10/MA0899.1/Jaspar

Match Rank:10
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCAGCAATAA---
--GGTAATAAAAA
 A G T C A G T C C T G A A C T G A G T C C G T A G T C A A C G T G C T A C T G A A C G T A C G T A C G T
A C G T A C G T C T A G T C A G G A C T T G C A T C G A G C A T C G T A C G T A G T C A G T C A G T C A