Information for 11-GCGGKYGCCCCTC (Motif 9)

A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C
Reverse Opposite:
A T C G G T C A C T A G A C T G A C T G A T C G T G A C T C G A G T A C T A G C G T A C A C T G A G T C
p-value:1e-8
log p-value:-1.872e+01
Information Content per bp:1.717
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.26%
Number of Background Sequences with motif53.4
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets53.9 +/- 23.6bp
Average Position of motif in Background46.3 +/- 27.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0052.1_Plagl1_1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GCGGKYGCCCCTC-
TTGGGGGCGCCCCTAG
 A C G T A C G T A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C A C G T
A C G T G A C T C T A G C T A G C A T G C T A G A C T G A T G C A T C G T G A C G A T C G T A C G A T C A C G T T C G A T A C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GCGGKYGCCCCTC-
----TTCCCCCTAC
 A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C A C G T
A C G T A C G T A C G T A C G T A G C T G A C T G T A C G T A C A T G C G T A C G T A C A C G T G T A C T A G C

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GCGGKYGCCCCTC
AGGGGATTCCCCT-
 A C G T A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GCGGKYGCCCCTC
AGGGGATTCCCCT-
 A C G T A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T A C G T

PB0114.1_Egr1_2/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCGGKYGCCCCTC----
-NNAGTCCCACTCNNNN
 A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:GCGGKYGCCCCTC
GGGGATTCCCCC-
 A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C A C G T

KLF5/MA0599.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCGGKYGCCCCTC---
------GCCCCGCCCC
 A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A G T C C T A G A G T C A G T C A G T C G A T C

PB0133.1_Hic1_2/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GCGGKYGCCCCTC---
GGGTGTGCCCAAAAGG
 A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

PB0095.1_Zfp161_1/Jaspar

Match Rank:9
Score:0.54
Offset:-6
Orientation:reverse strand
Alignment:------GCGGKYGCCCCTC
NCANGCGCGCGCGCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C
G C A T G A T C C T G A C T A G C T A G G A T C T C A G G A T C C T A G A G T C C T A G A G T C T A C G G A T C G A T C G T C A A C G T A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCGGKYGCCCCTC----
------GCCCCGCCCCC
 A C T G G T A C A C T G A T C G C A T G A G C T A C T G A T G C A G T C G T A C G A T C A C G T A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C