Information for 8-TCTTAACAAGAGR (Motif 6)

C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
Reverse Opposite:
A G C T G A T C A G C T T G A C C A G T C G A T A C T G G A C T C A G T C T G A C G T A C T A G C G T A
p-value:1e-10
log p-value:-2.413e+01
Information Content per bp:1.727
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif23.3
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets55.1 +/- 29.4bp
Average Position of motif in Background51.1 +/- 26.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0023.1_Gata6_1/Jaspar

Match Rank:1
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCTTAACAAGAGR
NNANTCTTATCTNNNNN
 A C G T A C G T A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
A G T C C G T A G C T A G A C T A C G T A T G C C G A T C G A T C T G A C G A T G T A C C G A T G T A C A C G T G C T A C A G T G C T A

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:2
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TCTTAACAAGAGR
-CACAGCAGGGGG
 C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

PB0123.1_Foxl1_2/Jaspar

Match Rank:3
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---TCTTAACAAGAGR
ATATCAAAACAAAACA
 A C G T A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
G C T A C G A T C G T A C G A T G A T C G C T A G C T A G T C A C G T A A G T C C G T A C G T A G T C A C G T A G T A C G T C A

PB0206.1_Zic2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTTAACAAGAGR
CCACACAGCAGGAGA
 A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0022.1_Gata5_1/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TCTTAACAAGAGR
NTNTTCTTATCAGTNTN
 A C G T A C G T A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
G C T A G C A T G T A C A G C T A G C T A T G C C G A T C G A T C G T A A C G T A G T C C G T A T C A G G A C T G C A T G C A T C G T A

Mitf/MA0620.1/Jaspar

Match Rank:6
Score:0.56
Offset:3
Orientation:forward strand
Alignment:TCTTAACAAGAGR
---GGTCACGTGG
 C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
A C G T A C G T A C G T C T A G T C A G A C G T T G A C G T C A A G T C T C A G G C A T A C T G T C A G

PB0121.1_Foxj3_2/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TCTTAACAAGAGR
AACACCAAAACAAAGGA
 A C G T A C G T A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

PB0120.1_Foxj1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCTTAACAAGAGR
ATGTCACAACAACAC-
 A C G T A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TCTTAACAAGAGR
CCACACAGCAGGAGA
 A C G T A C G T C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

SOX9/MA0077.1/Jaspar

Match Rank:10
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:TCTTAACAAGAGR
---GAACAATGG-
 C G A T A G T C G C A T G A C T G T C A C T G A G T A C G C T A G C T A A C T G C T G A C T A G T C G A
A C G T A C G T A C G T C T A G C G T A G C T A A G T C G C T A G C T A C G A T C T A G T A C G A C G T