Information for 7-TGAAATACAA (Motif 5)

C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A
Reverse Opposite:
A C G T C A G T C A T G A C G T C T G A A G C T A G C T C G A T A G T C G T C A
p-value:1e-11
log p-value:-2.676e+01
Information Content per bp:1.679
Number of Target Sequences with motif87.0
Percentage of Target Sequences with motif9.94%
Number of Background Sequences with motif2078.7
Percentage of Background Sequences with motif4.37%
Average Position of motif in Targets49.9 +/- 29.8bp
Average Position of motif in Background50.0 +/- 29.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0106.1_Arid5a_2/Jaspar

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--TGAAATACAA-----
CATACAATACGAAATAA
 A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T A C G T A C G T A C G T A C G T
A T G C C T A G G A C T C G T A T G A C C G T A T G C A A C G T T G C A T A G C T A C G C T G A C T G A C G T A A G C T T C G A T C G A

PH0075.1_Hoxd10/Jaspar

Match Rank:2
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TGAAATACAA-----
AATGCAATAAAATTTAT
 A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T A C G T A C G T A C G T A C G T
T G C A C T G A A C G T T C A G G A T C G T C A C G T A A G C T C G T A C G T A C G T A T C G A G A C T C G A T C G A T C G T A G C A T

MEF2C/MA0497.1/Jaspar

Match Rank:3
Score:0.63
Offset:-5
Orientation:forward strand
Alignment:-----TGAAATACAA
ATGCTAAAAATAGAA
 A C G T A C G T A C G T A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A

PH0046.1_Hoxa10/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TGAAATACAA----
TAGGTAATAAAATTCA
 A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T A C G T A C G T A C G T
C A G T G T C A A C T G T C A G G A C T G T C A C T G A G C A T C G T A C G T A G C T A G C T A G C A T C A G T G T A C C G T A

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGAAATACAA-
-GTCATAAAAN
 C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T
A C G T T C A G A G C T G T A C C G T A A C G T C G T A C G T A C G T A G C T A G A C T

PB0169.1_Sox15_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TGAAATACAA
TTGAATGAAATTCGA
 A C G T A C G T A C G T A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---TGAAATACAA
DCYAAAAATAGM-
 A C G T A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAATACAA-
-CCAATAAAAA
 C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T
A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A

Hoxd9/MA0913.1/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TGAAATACAA-
-GCAATAAAAA
 C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T
A C G T T C A G G A T C T G C A C T G A C G A T G C T A G C T A G C T A C G T A G C T A

PH0078.1_Hoxd13/Jaspar

Match Rank:10
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TGAAATACAA----
CTACCAATAAAATTCT
 A C G T A C G T C A G T T C A G G C T A C T G A T C G A G A C T T G C A G T A C G T C A G T C A A C G T A C G T A C G T A C G T
G T A C C G A T G C T A A G T C G A T C G C T A C G T A A G C T C G T A C G T A C G T A G C T A G A C T G A C T G T A C G A C T