Information for 4-GTCAGGKCAGTGT (Motif 9)

A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T
Reverse Opposite:
C G T A A G T C T G C A A G T C A C G T C T A G G T C A T A G C G T A C C G A T A C T G T C G A G T A C
p-value:1e-7
log p-value:-1.826e+01
Information Content per bp:1.730
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif3.63%
Number of Background Sequences with motif117.7
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets46.6 +/- 21.5bp
Average Position of motif in Background46.1 +/- 27.1bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX21/MA0866.1/Jaspar

Match Rank:1
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GTCAGGKCAGTGT-
AACAATGGTAGTGTT
 A C G T A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T
C T G A T C G A A T G C T C G A T C G A C A G T C A T G C A T G G A C T T C G A C A T G C G A T C T A G C A G T A G C T

SOX10/MA0442.1/Jaspar

Match Rank:2
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GTCAGGKCAGTGT
-------CTTTGT
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GTCAGGKCAGTGT----
NNNANTGCAGTGCNNTT
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:4
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GTCAGGKCAGTGT--
GYCTGGYYTNTGTCA
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T A C G T
A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGKCAGTGT
GGGGCTYGKCTGGGA
 A C G T A C G T A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A

ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTCAGGKCAGTGT----
--NAGGTCACNNTGACC
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A C T G A C A T G C T A G C A G T A G T C C G T A A T G C A T G C T A C G G C A T T C A G G T C A G A T C G T A C

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.52
Offset:2
Orientation:forward strand
Alignment:GTCAGGKCAGTGT
--CAGGTAAGTAT
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T
A C G T A C G T T G A C C G T A C T A G A C T G A C G T C T G A C G T A C T A G C G A T C T G A G A C T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GTCAGGKCAGTGT-
-----CTCATTGTC
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C

SOX4/MA0867.1/Jaspar

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GTCAGGKCAGTGT-
GAACAATTGCAGTGTT
 A C G T A C G T A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T
C T A G C G T A C T G A A G T C C T G A C T G A A C G T A C G T C A T G A G T C C T G A A C T G A C G T C T A G A G C T C G A T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:10
Score:0.50
Offset:3
Orientation:forward strand
Alignment:GTCAGGKCAGTGT----
---AGGTCANTGACCTN
 A C T G A C G T G T A C C G T A C A T G A C T G C A G T A G T C G T C A A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A C A T G C A T G A C G T A T G C T C G A C T G A A G C T T A C G T G C A G T A C G A T C A G C T A G T C