Information for 6-GACCTGACWA (Motif 23)

A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A C G T G T A C C G T A A C T G A C T G A C G T G T A C
p-value:1e-4
log p-value:-1.077e+01
Information Content per bp:1.906
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif31.8
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets61.2 +/- 22.2bp
Average Position of motif in Background49.5 +/- 30.6bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACWA---
AAAGACCTGTCAATCC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PH0104.1_Meis2/Jaspar

Match Rank:2
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACWA---
AAAGACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

PH0102.1_Meis1/Jaspar

Match Rank:3
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACWA---
AACGAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C G T A T A C G A T C G C T G A A T C G T G A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A G A T C

PH0105.1_Meis3/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACWA---
AATTACCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
C G T A C T G A C G A T A C G T C T G A A T G C G A T C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G C A G T A C

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACWA
TGACCTYA---
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A
A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:6
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACWA---
AAGCACCTGTCAATAT
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GACCTGACWA
TGACCT-----
 A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A
A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GACCTGACWA
-ARNTGACA-
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A
A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

PH0170.1_Tgif2/Jaspar

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---GACCTGACWA---
AACTAGCTGTCAATAC
 A C G T A C G T A C G T A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GACCTGACWA-
-VGCTGWCAVB
 A C T G C G T A A G T C A G T C A C G T A C T G C G T A A G T C C G T A C G T A A C G T
A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C