Information for 11-AGTTGTTCATGCTGTA (Motif 22)

G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
Reverse Opposite:
A C G T G T C A A G T C G T C A A C T G A G T C C G T A A C G T A C T G C G T A C G T A A G T C C G T A G C T A A G T C A C G T
p-value:1e-4
log p-value:-1.129e+01
Information Content per bp:1.917
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets64.5 +/- 5.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxj2/MA0614.1/Jaspar

Match Rank:1
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA
--TTGTTTAC------
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
A C G T A C G T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA---
----NNTCCTGCTGTGNNN
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer

Match Rank:3
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA
AGGTGTTAAT------
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
C T G A C T A G A T C G C G A T C T A G G C A T A C G T C T G A C T G A C G A T A C G T A C G T A C G T A C G T A C G T A C G T

FOXG1/MA0613.1/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA
--TTGTTTAC------
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
A C G T A C G T C G A T A C G T A C T G A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:forward strand
Alignment:AGTTGTTCATGCTGTA
TATTGTTTATT-----
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
G A C T C T G A G C A T C G A T A C T G A C G T A C G T A C G T C T G A A C G T C G A T A C G T A C G T A C G T A C G T A C G T

PH0016.1_Cux1_1/Jaspar

Match Rank:6
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--AGTTGTTCATGCTGTA
TNAGNTGATCAACCGGT-
 A C G T A C G T G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T A C G T

FOXF2/MA0030.1/Jaspar

Match Rank:7
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA
-NTTGTTTACGTTNN-
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
A C G T G C T A C G A T A C G T C T A G A C G T A C G T A C G T C G T A A G T C A T C G A C G T C A G T A C G T T C A G A C G T

MYF6/MA0667.1/Jaspar

Match Rank:8
Score:0.52
Offset:-3
Orientation:reverse strand
Alignment:---AGTTGTTCATGCTGTA
AACAGCTGTT---------
 A C G T A C G T A C G T G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
T C G A C T G A A T G C C G T A T C A G A G T C A G C T A C T G A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:9
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA
---TGTTTAC------
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A
A C G T A C G T A C G T C A G T C T A G A C G T C A G T A C G T C T G A G A T C A C G T A C G T A C G T A C G T A C G T A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:AGTTGTTCATGCTGTA---
----TNTCCTGCTGTGNNG
 G T C A A C T G C G A T A C G T A C T G A C G T A C G T G T A C C G T A A C G T A C T G A G T C C A G T C T A G A C G T C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A G T C C A G T T G A C G T A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G C A T C A T G T C A G