Information for 1-YTSAWGTTKCCAT (Motif 2)

A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T A C T G A C T G G T A C C G T A C G T A A T G C C G T A A C G T A T G C C G T A C T G A
p-value:1e-10
log p-value:-2.439e+01
Information Content per bp:1.877
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif4.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets63.4 +/- 23.2bp
Average Position of motif in Background63.3 +/- 20.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.71
Offset:4
Orientation:forward strand
Alignment:YTSAWGTTKCCAT-
----ATTTTCCATT
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A A C G T A C G T A C G T A C G T A G T C A G T C C T G A A G C T A G C T

NFAT5/MA0606.1/Jaspar

Match Rank:2
Score:0.67
Offset:4
Orientation:forward strand
Alignment:YTSAWGTTKCCAT-
----ATTTTCCATT
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A C G A T A C G T A C G T G C A T A G T C A G T C G C T A G A C T C G A T

X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.66
Offset:4
Orientation:forward strand
Alignment:YTSAWGTTKCCAT-----
----GGTTGCCATGGCAA
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C T A G A G C T G A C T C A T G A G T C G A T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

NFATC3/MA0625.1/Jaspar

Match Rank:4
Score:0.66
Offset:4
Orientation:forward strand
Alignment:YTSAWGTTKCCAT-
----ATTTTCCATT
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

Rfx1/MA0509.1/Jaspar

Match Rank:5
Score:0.65
Offset:5
Orientation:reverse strand
Alignment:YTSAWGTTKCCAT------
-----GTTGCCATGGNAAC
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.65
Offset:4
Orientation:forward strand
Alignment:YTSAWGTTKCCAT-----
----NGTTGCCATGGCAA
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

NFATC1/MA0624.1/Jaspar

Match Rank:7
Score:0.64
Offset:4
Orientation:forward strand
Alignment:YTSAWGTTKCCAT-
----ATTTTCCATT
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:YTSAWGTTKCCAT--
---CTGTTGCTAGGS
 A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:9
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--YTSAWGTTKCCAT
GKMTCADRTTWC---
 A C G T A C G T A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T
C T A G C A G T T G C A A C G T G A T C T C G A C T A G T C A G A C G T C A G T G C A T G A T C A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:10
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--YTSAWGTTKCCAT
GKVTCADRTTWC---
 A C G T A C G T A G C T A C G T A T C G C G T A C G A T A T C G A C G T A C G T A C T G A G T C A G T C C G T A A C G T
C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C A C G T A C G T A C G T