Information for 12-GGGCTATGCATGT (Motif 17)

A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
Reverse Opposite:
C G T A T A G C C G T A C G A T C T A G A G T C G T C A C G A T C T G A A C T G A G T C G T A C A G T C
p-value:1e-5
log p-value:-1.225e+01
Information Content per bp:1.742
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif2.02%
Number of Background Sequences with motif47.6
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets43.6 +/- 26.9bp
Average Position of motif in Background55.5 +/- 26.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:GGGCTATGCATGT
-GHATATKCAT--
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
A C G T C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GGGCTATGCATGT
----TATGCAAAT
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T

POU2F2/MA0507.1/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGGCTATGCATGT
TTCATTTGCATAT
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
G A C T C A G T G T A C G C T A A C G T G C A T A C G T C T A G A G T C G T C A A G C T C T G A G C A T

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:4
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GGGCTATGCATGT
---ATTTGCATAT
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
A C G T A C G T A C G T G C T A C G A T G A C T A C G T C T A G G A T C G T C A C G A T C G T A C A G T

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:5
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GGGCTATGCATGT
-GAATATTCAT--
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
A C G T T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T

POU5F1B/MA0792.1/Jaspar

Match Rank:6
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GGGCTATGCATGT
----TATGCAAAT
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T
A C G T A C G T A C G T A C G T G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T

PH0144.1_Pou2f2/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GGGCTATGCATGT----
-TTGTATGCAAATTAGA
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GGGCTATGCATGT------
----YATGCATATRCATRT
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C G T A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T

Pou2f3/MA0627.1/Jaspar

Match Rank:9
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGCTATGCATGT----
-TTGTATGCAAATTAGA
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A

PH0145.1_Pou2f3/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:GGGCTATGCATGT----
-TTGTATGCAAATTAGA
 A C T G A C T G C T A G G T A C A G C T C G T A A C G T C T A G A G T C C G T A C G A T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C A T G G A C T C G T A A G C T A C T G A G T C C G T A C G T A C G T A C A G T A C G T G T C A C T A G T G C A