Information for 11-CTBGTTGGVTGGC (Motif 16)

A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C
Reverse Opposite:
A C T G A G T C A G T C C G T A A G T C A G T C G T A C C G T A C T G A G T A C T C G A C G T A T C A G
p-value:1e-5
log p-value:-1.312e+01
Information Content per bp:1.783
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif17.8
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets40.8 +/- 14.1bp
Average Position of motif in Background48.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:CTBGTTGGVTGGC-----
--NGTAGGTTGGCATNNN
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:CTBGTTGGVTGGC--
------GGTTGGCAT
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTBGTTGGVTGGC
-TGATTGGCTANN
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PB0167.1_Sox13_2/Jaspar

Match Rank:4
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTBGTTGGVTGGC-----
-GTATTGGGTGGGTAATT
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T A C G T A C G T A C G T A C G T
A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:CTBGTTGGVTGGC---
-------NTTGGCANN
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.54
Offset:8
Orientation:forward strand
Alignment:CTBGTTGGVTGGC-
--------TTGGCA
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTBGTTGGVTGGC--
---CGTGGGTGGTCC
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T A C G T
A C G T A C G T A C G T A G T C A T C G G C A T C T A G A C T G T A C G C G A T T C A G C A T G A G C T T A G C G A T C

PBX1/MA0070.1/Jaspar

Match Rank:8
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTBGTTGGVTGGC
TTTGATTGATGN-
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T

PH0026.1_Duxbl/Jaspar

Match Rank:9
Score:0.53
Offset:-5
Orientation:reverse strand
Alignment:-----CTBGTTGGVTGGC
NNNNGTTGATTGGGTCG-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G A C G T

NFYB/MA0502.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CTBGTTGGVTGGC--
CTGATTGGTCNATTT
 A G T C A C G T A C G T A C T G A G C T A C G T A C T G A C T G T A C G A C G T C T A G A C T G A G T C A C G T A C G T
A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T